Amycolatopsis sp. CA-230715: HUW46_07978
Help
Entry
HUW46_07978 CDS
T10444
Symbol
colD
Name
(GenBank) GDP-4-keto-6-deoxy-D-mannose 3-dehydratase
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz00523
Polyketide sugar unit biosynthesis
amyz01100
Metabolic pathways
amyz01110
Biosynthesis of secondary metabolites
amyz01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HUW46_07978 (colD)
Enzymes [BR:
amyz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
HUW46_07978 (colD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QWF84528
LinkDB
All DBs
Position
complement(8619881..8621185)
Genome browser
AA seq
434 aa
AA seq
DB search
MDVGESKAQILKLVREYHRQRETGQFVPGTTPVLSSGAVLDEQDRASLVEAALDLRIAAG
VHSRRFERELARTFGLRKAHLTNSGSSANLLALSALTSPALEDRRLVPGDEVITVAAGFP
TTVNPIVQNGLVPVFVDIELGTYNTTPDRIAAAIGPRTKAIMIAHALGNPFAVAEVAELA
ADRDLFLVEDNCDAVGSTYRGRLTGTFGDLATVSFYPAHHITVGEGGCVLTDNLALARIV
EQLRDWGRDCWCEPGEDDTCFKRFDFQLGTLPRGYDHKYVFSHVGYNLKSTDLQAALGLS
QLAKLPGFGEARRANWRRLRDALDGLPWLLLPEPTPGSDPSWFGFVLTIQPGSPFTLREL
VSFMESRKISTRRFFGGNLTRHPAYLDVPYRVAGELTNADAVTERTFWIGVYPGITAEMI
DFVAASIREFVLAR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtcggcgaaagcaaggcgcagatcctcaagttggtgcgtgagtaccaccgccag
cgcgaaaccgggcaattcgtgcccggcacgacaccggtgctgtcctccggggccgtgctg
gacgaacaggacagggcgtccttggtcgaagccgcgctcgatcttcgcatcgccgcgggc
gtgcactcccgccggttcgagcgcgaactggcgcggacgttcggactgcgcaaggcacac
ctgaccaactcggggtcgtcggcgaacctgctggcgttgtccgcgctgacttcgcccgcg
ctggaggatcgtcggctggtgcccggcgacgaagtgatcaccgtcgcggccggcttcccc
accacggtgaacccgatcgtgcagaacggtctggtgccggtgttcgtggatatcgaactc
ggcacgtacaacacgaccccggaccggatcgccgccgcgatcgggccgcgcaccaaggcc
atcatgatcgcgcacgcgctgggcaatccgttcgccgtggccgaggtcgccgagctcgcg
gccgaccgtgacctgttcctggtcgaagacaactgcgacgccgtcggctcgacctaccgt
ggccggcttaccggtaccttcggcgatctcgcgacggtgagcttctaccccgcccaccac
atcaccgtcggtgagggcggctgcgtgctcaccgacaacctggcgctggccaggatcgtg
gagcaactgcgcgactggggacgggactgctggtgcgaaccgggcgaggacgacacctgc
ttcaagcggttcgacttccagctcggcacgctgccccgcggttacgaccacaagtacgtc
ttctcgcacgtcgggtacaacctgaagtccaccgatctccaggcggcgctggggttgagc
cagctggccaaactgccggggttcggcgaggcccgccgcgccaactggcggcggttgcgg
gacgcgttggacggcctgccgtggctgctgctgccggagccgaccccgggatcggatccg
agctggttcggattcgtgttgaccatccagccgggcagcccgttcacccttcgggaactg
gtgtccttcatggaatccaggaagatcagcacccgccggttcttcggcggcaacctcacc
cgccatcccgcctacctggacgtcccgtaccgggtggccggcgagttgaccaacgccgac
gcggtcaccgagcggaccttctggatcggcgtctaccccggtatcaccgcggagatgatc
gacttcgtcgcggcttccattcgggagttcgtgctggcgcgatga
DBGET
integrated database retrieval system
