Amycolatopsis sp. CA-230715: HUW46_08008
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Entry
HUW46_08008 CDS
T10444
Symbol
lcfB_11
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz00061
Fatty acid biosynthesis
amyz00071
Fatty acid degradation
amyz01100
Metabolic pathways
amyz01212
Fatty acid metabolism
amyz02024
Quorum sensing
amyz04146
Peroxisome
Module
amyz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HUW46_08008 (lcfB_11)
00071 Fatty acid degradation
HUW46_08008 (lcfB_11)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HUW46_08008 (lcfB_11)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUW46_08008 (lcfB_11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amyz01004
]
HUW46_08008 (lcfB_11)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amyz04147
]
HUW46_08008 (lcfB_11)
Enzymes [BR:
amyz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HUW46_08008 (lcfB_11)
Lipid biosynthesis proteins [BR:
amyz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HUW46_08008 (lcfB_11)
Exosome [BR:
amyz04147
]
Exosomal proteins
Exosomal proteins of breast milk
HUW46_08008 (lcfB_11)
Exosomal proteins of breast cancer cells
HUW46_08008 (lcfB_11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QWF84558
LinkDB
All DBs
Position
8655137..8656789
Genome browser
AA seq
550 aa
AA seq
DB search
MSWYETKPWLAQYDERMLAAPPIEATTLLATFRSAVARAPERTAISYFDGSLTYREVDEL
SDGVAAYLRSAGFVPGDRLALVLQNIPQFVLALLGAWKAGGIAVPVNPMYRERELTHVFT
DAGVRAVVCSPKAWRDRISAVAAAAGVPIGLVASELDFQTRNDERVLGGAARVPVEGARD
LLDIARQYHDAVPDPGLSGGDVALISYTSGTSGTPKGATNTHRNIAVNAASLRTFSDMAE
GGVIFTLAPLFHITGMVCELATAIDLAGTLVLAYRFEAGVVLDAFRETSPVYTVGPSTAY
MALMAHPDATREHFASFELLYSGGAALPPAVVEAFREKFGQYIRNGYGLTETTAGCVSVP
GSREAPIDPASGTISIGLPVPGTIVRILGDDGTEAPQGEPGEIVIEGPTVVPGYWNLAEA
TEQSMPGGRLHTGDIGFMDADGWVYVVDRKKDMINASGFKVWPREVEDVLYTHEHVREAA
VVGVPDEYRGETVKAYVSARPGTSPDPEELIAYCRAQLAAYKSPRTVEVLAELPKTASGK
ILRRELRARD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtacgaaacgaaaccctggctcgcgcagtacgacgagcgcatgctcgccgcg
ccgccgatcgaagcgacgacgctgctcgccacgttccgctcggccgtcgcccgcgcgcct
gagcggaccgcgatctcctacttcgacggctcgctcacctaccgcgaggtggacgagctg
tcggacggcgtggcggcctacctccgctcggcgggcttcgtgccgggtgaccggctcgcg
ctggtgctgcagaacatcccgcagttcgtgctggcgctgctcggcgcctggaaggcgggc
gggatcgcggtcccggtgaacccgatgtaccgcgagcgggagctgacccacgtgttcacc
gacgcgggggtgcgggccgtggtgtgctcgccgaaggcgtggcgcgaccggatctcggcg
gtcgcggcggcagcgggggtgccgatcggactggtcgcgagcgaactggacttccagacc
aggaacgacgaacgggtgctcggcggtgcggcgcgcgtgcccgtcgaaggggcgcgcgac
ctgctcgacatcgcgcgccagtaccacgacgcggtgccggatcccgggctctccggcggc
gacgtcgcgctcatcagctacacctcgggtaccagcggcacaccgaagggcgcgaccaac
acgcatcgcaacatcgcggtgaacgccgcgtccctccgcacgttttccgatatggcggag
ggtggggtgatcttcacgctcgccccgctcttccacatcaccggcatggtgtgcgaactg
gccaccgcgatcgacctggcgggcacgctggtgctggcgtaccggttcgaagcgggcgtg
gtgctcgacgcgttccgggaaacgagcccggtctacacggtcggcccgtcgacggcgtac
atggcgttgatggcccatcccgacgcgacgcgcgagcacttcgcgtcgttcgagctgctc
tactcgggcggggcggcacttccgcccgcggtggtggaggcgttccgcgagaagttcggc
cagtacatccgcaacggttacggcctcaccgagacgacagcgggctgcgtctcggtgccg
gggtcgagggaggcgccgatcgaccccgcctccggcaccatctcgatcggcctgccggtg
ccggggacgatcgtgcggatcctcggggacgacggaaccgaggcgccgcaaggggaaccg
ggcgagatcgtgatcgagggcccgaccgtggtgcccggctactggaacctcgccgaggcg
accgagcagagcatgccaggcgggcggctgcacaccggcgacatcgggttcatggacgcc
gacggctgggtgtacgtggtggaccgcaagaaagacatgatcaacgcctccgggttcaag
gtgtggccgcgcgaggtcgaggacgtgctctacacccacgagcacgtgcgcgaggccgcg
gtcgtcggcgtccccgacgagtaccgcggcgagacggtgaaggcgtacgtgagcgcgcgc
cccggcaccagccccgatcccgaagagctgatcgcctactgccgtgcgcagctcgccgcc
tacaagagcccgcggacggtcgaagtgctcgccgaactgccgaaaacggcgagcgggaaa
atcctgcgtcgtgagctgcgggccagggactaa
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