Amycolatopsis sp. CA-230715: HUW46_08782
Help
Entry
HUW46_08782 CDS
T10444
Symbol
rhaR_4
Name
(GenBank) HTH-type transcriptional activator RhaR
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyz03000
]
HUW46_08782 (rhaR_4)
Transcription factors [BR:
amyz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HUW46_08782 (rhaR_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QWF85328
LinkDB
All DBs
Position
9588306..9589310
Genome browser
AA seq
334 aa
AA seq
DB search
MRTIQAMATVALAVTDGMPLFELGIPCTIFGQGNPHAVNAGYELTICASEGARVGGWLRA
EASHGLDALVDADTVVVPACDAAMDAPPADLVDAVRAAHDRGARVASICTGAFVLAAAGL
LDGRRATTHWMYADRLARHYPRVDVDPGVLYIDDGDVLTAAGQAAGIDLCLHMVRADHGA
AVANGLARRLVVSPHRSGGQAQFIAAPLAEAEERGADDRHDLSGLLDATLTRLGEPLTVA
DLAREANMSLRNFGRRFTAVTGTSPLRWLLTQRIRRAQELLETGDDSVEQIAVQVGMGTA
TTLRRHFNRMVGISPTAYRRAFTEDRAHPARAEA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaattcaggccatggctaccgtcgcgctcgccgtgaccgacgggatgcccctg
ttcgagctgggcatcccatgcacgatcttcggccaggggaacccgcacgcggtgaacgcg
ggttacgagctgacgatctgcgcgtccgaaggggcgcgcgtcggcggctggctgcgcgcg
gaagcgtcgcacggcctcgacgcgctggtggacgccgacacggtcgtcgtccccgcctgc
gacgcagcgatggacgccccgcccgccgacctggtggacgcggtgcgcgcggcacacgac
cggggcgcgcgggtggcgtccatctgcaccggcgccttcgtgctcgccgccgcggggctg
ctcgacgggcgccgcgcgaccacgcactggatgtacgcggaccggctcgcccgccactat
ccccgcgtcgacgtggatcccggcgtgctctacatcgacgacggcgacgtcctcaccgcg
gcgggccaggcggccgggatcgatctgtgcctgcacatggtccgcgccgaccacggcgcc
gcggtggcgaacgggctggcgaggcgcctcgtggtgtccccgcaccggtccggcggccaa
gcccagttcatcgccgcgccgctggccgaggccgaggagcgcggggccgacgaccggcac
gatctgagcggcctgctcgacgccaccctgacgcggctcggtgaaccgctgaccgtcgcg
gacctggcccgtgaggcgaacatgagcctgcgcaacttcggtcggcggttcaccgcggtc
accggcacgagcccgctgcgctggctactgacccagcgcatcaggcgcgcccaagagctg
ctcgaaaccggcgacgacagcgtggagcagatcgccgtgcaggtcggaatgggcaccgcc
accacgcttcgtcgccatttcaaccggatggtcgggatttcgccgactgcctaccgtcgc
gcgttcaccgaggaccgcgcacacccagcgcgcgcggaagcctga
DBGET
integrated database retrieval system
