Amycolatopsis sp. CA-230715: HUW46_09035
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Entry
HUW46_09035 CDS
T10444
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HUW46_09035 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
amyz03011
]
HUW46_09035 (rpsA)
Ribosome [BR:
amyz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HUW46_09035 (rpsA)
Bacteria
HUW46_09035 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
DUF2110
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
QWF85580
LinkDB
All DBs
Position
complement(9853868..9855364)
Genome browser
AA seq
498 aa
AA seq
DB search
MTIDTATAPTATTPQQVAVNDIGSEEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLD
IGYKTEGVIPSRELSIKHDVDPAEVVTVGDEVEALVLQKEDKEGRLILSKKRAQYERAWG
TIEELKEKDEPVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKII
ELDKNRNNVVLSRRAYLEQTQSEVRSEFLNALAKGQVRKGVVSSIVNFGAFVDLGGVDGL
VHVSELSWKHIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWRQFARTHAIG
QIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEIPEQVVQVNGDVMVKVIDIDLE
RRRISLSLKQANEGVTPETEFDPTQYGMAAEYDTEGNYIYPEGFDPDTQEWQEGFDKQRE
EWERQYAEAHTRYEAHMKQVQKAAEADAAAAADAATGVDGGEQSYTSAPADNAPKGGGGT
LASDEQLAALREKLSGGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgacaccgccaccgccccgactgcgaccaccccgcagcaagtcgccgtgaac
gacatcgggtcggaggaagacttcctcgccgccatcgacaagacgatcaagtacttcaac
gatggcgacatcgtcgaaggcaccatcgtcaaggtcgatcgcgacgaagtgctgctcgac
atcgggtacaagaccgagggcgtcatcccctcgcgtgagctgtccatcaagcacgatgtc
gacccggctgaggttgtcaccgtcggcgatgaggtcgaagccctcgttctccagaaggag
gacaaggaaggccgtctgatcctgtccaagaagcgcgcgcagtacgagcgcgcctggggc
acgatcgaggagctcaaggagaaggacgagcccgtcaagggcaccgtcatcgaggtcgtc
aagggcggcctcatcctggacatcggcctgcgcggcttcctgcccgcgtcgctggtcgag
atgcgccgcgtgcgcgacctgcagccctacgtcggccgtgagctcgaggcgaagatcatc
gagctggacaagaaccgcaacaacgtggtcctgtcccgccgtgcctacctggagcagacc
cagtccgaggtgcgcagcgagttcctcaacgcgctcgccaagggccaggtccgcaagggc
gtcgtgtcctcgatcgtcaacttcggtgccttcgtggacctcggtggcgtcgacggcctg
gtgcacgtctcggagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgaggtc
ggccaggaggtcacggtcgaggtcctcgacgtggacatggaccgcgagcgcgtgtccctg
tcgctgaaggcgacccaggaagacccgtggcgccagttcgcccgcacccacgcgatcggc
cagatcgtgccgggcaaggtcaccaagctcgtcccgttcggcgcgttcgtccgcgtcgag
gagggcatcgagggcctggtgcacatctccgagctggccgagcgccacgtcgagatcccg
gagcaggtcgtccaggtcaacggggacgtcatggtcaaggtcatcgacatcgacctcgag
cgtcgccgcatctcgctgtcgctgaagcaggcgaacgagggcgtcacgccggagaccgag
ttcgaccccacccagtacggcatggccgccgagtacgacaccgagggcaactacatctac
cccgaaggtttcgacccggacacccaggagtggcaggaaggcttcgacaagcagcgtgag
gagtgggagcgccagtacgccgaggcgcacacccgttacgaggcccacatgaagcaggtc
cagaaggccgccgaggccgacgcggccgcggccgccgacgccgcgaccggtgtcgacggt
ggcgagcagagctacacctccgccccggccgacaacgcgccgaagggtggcggcggcacg
ctcgccagcgacgagcagctcgccgcgctgcgggagaagctctccggcggtgcgtga
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