Amycolatopsis sp. CA-230715: HUW46_09047
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Entry
HUW46_09047 CDS
T10444
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz03030
DNA replication
amyz03410
Base excision repair
amyz03420
Nucleotide excision repair
amyz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUW46_09047 (polA)
03410 Base excision repair
HUW46_09047 (polA)
03420 Nucleotide excision repair
HUW46_09047 (polA)
03440 Homologous recombination
HUW46_09047 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyz03032
]
HUW46_09047 (polA)
03400 DNA repair and recombination proteins [BR:
amyz03400
]
HUW46_09047 (polA)
Enzymes [BR:
amyz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUW46_09047 (polA)
DNA replication proteins [BR:
amyz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUW46_09047 (polA)
DNA repair and recombination proteins [BR:
amyz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HUW46_09047 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUW46_09047 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
QWF85592
LinkDB
All DBs
Position
complement(9865765..9868425)
Genome browser
AA seq
886 aa
AA seq
DB search
MAYRAFFAVPADRFRTSTGQVTNAVFGFTSMLINLLRDEQPTHLAVAFDLSRKTFRSETF
AEYKATRSATPDDFKGQVALVQEVLSVLGIPALTKENYEADDIIATLTTQAIAEDYSVLI
CTGDRDALQLVNEQVTVLYPKKGVSELVRFDPAAVEDKYNLTPAQYPDFAALRGDPSDNL
PGIPGVGEKTAAKWIKQFGSLGDLIDRVDEVKGKVGDALRAHLDAVMLNRQLTELVRDVP
LEAIPGDLELKPWDRDAVHRLFDELEFRVLRDRLFATLSSAEPEADEGFDISGEALATGQ
LEAWLAKHSPTGKPVGLSFRTTGASVTADVEAVSFATADGEGAYVEVASMDESDEKALAA
WFADSGIPKVGHSLKVALHAVLARGWRFGGLTMDTALAAYLVRPGQRSFELDDLVLRYLQ
RELRSEADADDGQLSLLDSDGAEADGGVDQKVVQAELVRARAVAELAEALAGELDGIGGV
KLLNEIELPLLEVITDVEAAGIAVDVDQLTELESHYASGVRKAADDAYAVIGKQINLGSP
KQLQVVLFDELDMPKTKRTKTGYTTDADALQGLFEKTEHPFLQHLLAHRDASRLRSTVEG
LIKAIADDGRIHTTLHQTIAATGRLSSVDPNLQNIPVRTEEGRRIRDAFVVGDGYAELMT
ADYSQIEMRIMAHLSGDEGLIEAFNTGEDLHTFVASKAFALPAQEVTPELRYRVKAMSYG
LAYGLSAYGLAQQLRISTEEAKEQMEAYFARFGGVRDYLQSVVVEASKVGYTETIFGRRR
YLPDLNSDNRQRREMAERMALNAPIQGSAADIIKVAMLNVHKALSESDLKSRLLLQVHDE
LVLEVCEGERDAVEALVREGMGSAYRLAVPLEVSVGVGRSWNEAAH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccgcgccttcttcgccgtacccgcggaccggttccgcacgtccacgggccag
gtcacgaacgcggtgttcgggttcacctcgatgctcatcaacctgctgcgcgacgagcag
cccacgcatctcgcggtcgcgttcgacctgtcccgcaagacgttccgctccgagacgttc
gccgagtacaaggccacccgctcggcgacgccggacgatttcaagggccaggtcgcgctc
gtgcaggaggtgctgagcgtgctcggcatcccggcgctgaccaaggagaactacgaggcg
gacgacatcatcgccacgctcaccacgcaggcgatcgccgaggactactcggtgctcatc
tgcaccggcgaccgcgacgcgctgcagctggtgaacgagcaggtcaccgtgctgtacccg
aagaagggcgtgtcggagctcgtccggttcgacccggcggcggtggaggacaagtacaac
ctcacgccggcgcagtaccccgatttcgcggccctgcgcggcgacccgtcggacaacctg
cccggtatccccggcgtgggggagaagacggcggcgaagtggatcaagcagttcggctcc
ctcggcgacctgatcgaccgggtcgacgaggtcaagggcaaggtcggcgacgcgctgcgc
gcccacctcgacgcggtgatgctcaaccgccagctcaccgagctcgtgcgggacgtgccg
ctggaggcgatccccggcgacctcgagctgaagccgtgggatcgcgacgcggtgcaccgc
ctcttcgacgaactggagttccgcgtcctgcgggacaggctgttcgcgacgctgtccagc
gcggagccggaggcggacgagggcttcgacatctcgggtgaggcactggcgacggggcag
ctggaagcgtggctggcgaagcactcgcccacgggcaagccggtcggcctgtcgttccgc
accaccggagcctccgtcaccgccgatgtcgaagcggtttcgttcgcgacggcggacggt
gaaggcgcctacgtcgaggtcgcctcgatggacgagtccgacgagaaggcgctggccgcc
tggttcgccgactcgggcatcccgaaggtcgggcactcgctgaaggtcgcgctgcacgcg
gtgctggccaggggctggcggttcggcgggctgaccatggacaccgcgctcgccgcgtac
ctggtccggccaggtcagcgctcgttcgaactggacgacctcgtgctccggtacctgcag
cgggagctgcgctcggaggccgacgccgacgacggccagctgtcccttctggacagtgac
ggcgcggaggccgacggcggggtggaccagaaggtggtgcaggccgagctggtgcgggcg
cgcgcggtcgcggagctggccgaggcgttggccggtgagctggacggcatcggcggcgtg
aagctgctcaacgagatcgagctgccgctgctcgaggtgatcaccgacgtcgaggcggcc
gggatcgcggtcgacgtcgaccagctcaccgagctggagtcgcactacgcgagcggggtc
cgcaaggcggccgacgacgcgtacgccgtgatcggaaagcagatcaacctcggttcgccg
aagcagctgcaggtcgtgctgttcgacgagctggacatgccgaagaccaagcgcaccaag
accgggtacaccaccgacgccgacgcgctgcagggcctgttcgagaagaccgagcacccg
ttcctgcagcacctgctcgcgcaccgggacgcgagccgcctgaggtccactgtggaggga
ctgatcaaggcgatcgcggacgacggccggatccacaccacgctgcaccagaccatcgcg
gccaccggacgactgtcctctgtggacccgaacctgcagaacatcccggtccgcaccgag
gagggcaggcggatcagggacgcgttcgtggtcggcgacgggtacgccgagctgatgacc
gcggactacagccagatcgagatgcgcatcatggcgcacctgtccggggacgaggggctg
atcgaggccttcaacaccggcgaggacctgcacaccttcgtggcgtcgaaggcgttcgcg
ctgcccgcccaggaagtcaccccggagctgcgctaccgcgtgaaggcgatgtcgtacggc
ctggcctacgggctgtcggcctacggtctcgcacagcagctgcggatttccaccgaagag
gccaaggagcagatggaggcctacttcgcgcggttcggcggcgtgcgggactacctgcag
tccgtggtcgtcgaggcctcgaaggtgggttacaccgagacgatcttcggccgtcgccgc
tacctgcccgatctcaacagcgacaaccgccagcgccgcgagatggccgagcggatggcg
ctcaacgccccgatccagggcagcgcggcggacatcatcaaggtcgcgatgctgaatgtg
cacaaggcgctgagcgagtcggacctgaagagcaggctgctgctgcaggtgcacgacgaa
ctggtgctggaggtctgcgagggcgagcgcgacgccgtcgaagcgctggtgcgcgagggc
atgggctcggcttaccgcctggcggtcccgctcgaggtgtcggtcggcgtcggccggtcc
tggaacgaggcggcgcactga
DBGET
integrated database retrieval system
