Amycolatopsis sp. CA-230715: HUW46_09502
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Entry
HUW46_09502 CDS
T10444
Symbol
ydcV_2
Name
(GenBank) Inner membrane ABC transporter permease protein YdcV
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUW46_09502 (ydcV_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyz02000
]
HUW46_09502 (ydcV_2)
Transporters [BR:
amyz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HUW46_09502 (ydcV_2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QWF86021
LinkDB
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Position
complement(10321127..10321945)
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AA seq
272 aa
AA seq
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MADSVTRVARKERTLGAGLRIWVALVGFVLIAPTLVVIPMSFGAGSTFQFPPEGWSLRWY
GEFFGSKQWLGSLANSVQIGLLAAALATVLGVAAAFGLDRARFRGRGAVRQVLMAPMILP
GIIVAVAVYGVFLRWQLNGTMLGFVLAHTVLGVPFVLTSVQTSLAGYDPTMERAAASLGA
NRFTTLRMVILPLVAPGVASGFVFAFATSFDEVVIALFLQTPDVKTLPVKMYESIVLEID
PTIAAASSLIVVFTTVLLLVPQMLRRRSDHDR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactccgtcacgcgggtggcccgcaaggaacgcacgctcggtgcggggctgcgg
atctgggtcgcgctcgtcgggttcgtgctgatcgcgccgacgctcgtggtcatcccgatg
agcttcggcgcgggatcgacgttccagttcccgcccgagggctggtcgctgcgctggtac
ggcgagttcttcggcagcaagcagtggctggggtcgctggccaactccgtccaaatcgga
ctgctggccgccgcgctggccaccgtgctcggggtcgccgcggcgttcgggctcgaccgc
gcccgcttccgcggccgcggcgccgtccggcaggtgctgatggcgccgatgatcctgccc
ggcatcatcgtcgcggtcgcggtgtacggggtcttcctgcggtggcagctcaacggcacc
atgctcggcttcgtgctggcccacacggtgctcggtgtgccgttcgtgctgacgtcggtg
cagaccagcctcgccgggtacgaccccacgatggaacgggctgcggcgagcctcggggcg
aaccggttcacgacgctgcgcatggtgatcctgccgctcgtcgcgccgggagtggcttcc
ggtttcgtgttcgccttcgccacttcgttcgacgaggtggtcatcgccctgttcctgcag
accccggacgtcaagacgctgccggtgaagatgtacgagtcgatcgtgctggagatcgac
ccgaccatcgccgcggcgtccagcctcatcgtggtgttcacgacggtcctgctgctcgtg
ccccagatgcttcgccgaaggagcgatcatgaccgatag
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