Amycolatopsis sp. CA-230715: HUW46_09504
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Entry
HUW46_09504 CDS
T10444
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUW46_09504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyz02000
]
HUW46_09504
Transporters [BR:
amyz02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HUW46_09504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_11
SBP_bac_1
SBP_bac_6
PNP_UDP_1
GYF_ATXR3
Motif
Other DBs
NCBI-ProteinID:
QWF86023
LinkDB
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Position
complement(10322798..10323832)
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AA seq
344 aa
AA seq
DB search
MRIPALLSAATILLAAGCAVSEGGENSLVFVSYGQGAYQAGQRSAVLNPYTAKTGTTVTI
DGPSSMAKLKAMVEAGKVAWDVVDTEASSAAQACGTLVEPVDMGPLASAFPAGTLTPCGV
PDAFFGLTLMYNADVYREHPPTRLSDFFDRGRFPGRRIIYGNDPSVGTLEAALLADGVPK
DRLYPLDVRRALAMYDRIRPELTISDTYGDQQQRMAGAQADLALIVSARAYSLLKAGATN
WKVVSGVPIPVTWDVLVVPKGSRRTEQAKDLIRFASEPAQSAAFAEQAGVGPANEAAKPR
YAEIGRQLDIWGDDKEDLRVLSDVKWWAANRVEVVRTWSDWKTG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgcggataccagcgttgttgtccgcggcgacgatcctcctcgccgccgggtgcgccgtc
tccgagggcggcgagaactccctcgtgttcgtttcctacggccaaggcgcctaccaggcc
gggcagcggtccgccgtgctgaacccgtacacggcgaagaccggcaccacggtcacgatc
gacggcccgtccagcatggccaagctcaaggcgatggtcgaggcgggcaaggtcgcctgg
gacgtcgtcgacaccgaggcttcgtcggcggcgcaggcgtgcggcacgctcgtcgagccg
gtcgacatggggccgctcgcctcggcgttcccggctgggacgctgacgccgtgcggtgtc
ccggacgcgttcttcgggctgacgctgatgtacaacgccgacgtctaccgcgagcacccg
ccgacccggctgtccgacttcttcgaccgcggccggttccccggcaggcggatcatctac
ggcaacgacccgagcgtcggcacgctggaggcggcgctgctcgccgacggcgtgccgaag
gaccggctctacccgctcgacgtgcggcgcgcgctggcgatgtacgaccggatccggccc
gagctgacgatcagcgacacctacggcgaccagcagcagcgcatggccggcgcgcaggcg
gacctggcgctcatcgtcagtgcccgcgcctactcgctgctgaaagccggtgccaccaac
tggaaggtggtttccggggtgccgatcccggtcacctgggacgttttggtggtgcccaag
ggatcccgccgcaccgagcaggcgaaggacctgatccgcttcgcctccgaaccggcgcag
tcggccgccttcgccgagcaggcgggggtgggccccgccaacgaagcggcgaagccccgc
tacgcggagatcgggcggcagctggacatctggggtgacgacaaggaggacctgcgcgtg
ctcagcgacgtgaagtggtgggcggccaaccgggtcgaggtcgtgcggacctggtcggac
tggaagaccggatga
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