Amycolatopsis sp. CA-230715: HUW46_09506
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Entry
HUW46_09506 CDS
T10444
Symbol
gabD_2
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz00250
Alanine, aspartate and glutamate metabolism
amyz00310
Lysine degradation
amyz00350
Tyrosine metabolism
amyz00650
Butanoate metabolism
amyz00760
Nicotinate and nicotinamide metabolism
amyz01100
Metabolic pathways
amyz01120
Microbial metabolism in diverse environments
Module
amyz_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HUW46_09506 (gabD_2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HUW46_09506 (gabD_2)
00310 Lysine degradation
HUW46_09506 (gabD_2)
00350 Tyrosine metabolism
HUW46_09506 (gabD_2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HUW46_09506 (gabD_2)
Enzymes [BR:
amyz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HUW46_09506 (gabD_2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HUW46_09506 (gabD_2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HUW46_09506 (gabD_2)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QWF86025
LinkDB
All DBs
Position
complement(10325167..10326612)
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AA seq
481 aa
AA seq
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MSDTTVATLLIEGRWVAAPSSFDVVDPASLEVIGQASDATAEHARAALDAASAAFRGWAG
TDPETRGTYLRAGANAIRARRDDLARLLSKENGKPLAEAAGELAGAARMLDWAAEEGRRA
DGRVTPANAAGPGLVLRSPVGPVLAITPWNFPASMLIRKVGLALAAGCTVVAKPAEQTPL
IATALLGILQETGLPAGVLGSLTTSRPAELVDALLTDRRLRKVSFTGSTEVGLGLLRRTG
SVLRRTSLEMGGHSPAIVLEDADLEAAASGVVTAKFFNAGQSCTAVNRLYVHEGIREDLL
ALIEKKTSALRLGRGDAEGVAVGPLIDEAGIAKVERQVADAVEQGARVLVGGNRWEPGDP
ALRGHFFQPTVLVDVTPGMLIAHEETFGPALAVSTFTDDEEVVELANATEYGLAAYVFGS
DLRRIWRLLDRLDFGVFGVNDPAPVRPELPFGGQKNSGQEREGGSEGIDAYTETKAVALR
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaccaccgtcgcgaccctgctgatcgaaggccgctgggtcgccgcgccctcg
tcgttcgacgtggtcgaccccgcgagcctcgaagtgatcggccaggcctcggacgccacc
gccgagcacgctcgtgccgcactcgacgcggcttcggccgccttccgcgggtgggcagga
acggatcccgagacccgcggcacctacctccgcgcgggcgcgaacgccatccgcgcccgt
cgtgacgatctcgcccggttgctcagcaaggaaaacggtaaaccgctcgcggaagcggcg
ggggaactggccggtgccgcgcggatgctggactgggccgcggaggaggggcgccgcgcc
gacggcagggtgaccccggcgaacgcggcgggccccggactggtactgcgcagcccggtc
gggccggtgctcgcgatcacgccgtggaactttccggctagcatgctgatccgcaaggtg
gggctcgcgctcgccgccgggtgcacggtggtcgcgaaacccgccgagcagacgcccctc
atcgccacggcactgctcggaatcctgcaggagaccggcctgcccgcgggcgtgctcgga
tcgctcaccacgtcgcggcccgcggagctggtggacgccctgctcaccgatcgcaggctg
cgcaaggtgagcttcaccgggtcgacggaggtcggcctgggactgttgcgccgcaccggt
tccgtgctgcgccggacctcgctggagatgggcggccactcaccggcgatcgtcctcgaa
gacgccgatctcgaagcggccgcgtccggggtggtgacggcgaagttcttcaacgccggg
cagagctgcaccgcggtgaaccggctgtacgtgcacgaaggcatccgcgaagacctgctg
gcgctgatcgagaagaagacgtccgcactgcggctcgggcgcggggacgccgagggcgtc
gcggtggggccgttgatcgacgaggccgggatcgcgaaggtcgagcgccaggtcgccgac
gccgtcgagcagggggcgcgggtgctggtcggcggaaaccgctgggagccgggcgatccc
gcgctgcgcggccacttcttccagccgaccgtgctcgtggacgtgacccccgggatgctg
atcgcgcacgaagagactttcggtcccgccttggccgtgtcgacgttcaccgacgacgag
gaagtcgtcgagctggccaacgcgaccgagtacggcctcgccgcgtacgtgttcggctcc
gatctccgccgcatctggcgcctgctcgaccggctcgacttcggcgtgttcggcgtgaac
gaccccgccccggtccgcccggaactcccgttcggcgggcagaagaactccgggcaggaa
cgcgaaggcggcagcgagggcatcgacgcctacaccgagaccaaagccgtcgcgctgcgt
ttctga
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