Amycolatopsis mediterranei RB: B737_1227
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Entry
B737_1227 CDS
T02804
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz03420
Nucleotide excision repair
amz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B737_1227
03430 Mismatch repair
B737_1227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amz03400
]
B737_1227
Enzymes [BR:
amz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B737_1227
DNA repair and recombination proteins [BR:
amz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B737_1227
MMR (mismatch excision repair)
Other MMR factors
B737_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGT81891
LinkDB
All DBs
Position
1319110..1321194
Genome browser
AA seq
694 aa
AA seq
DB search
MTGVLSTKSINRLLDGLDPEQRAAASAPRGPVCVLAGAGTGKTRTITHRIAHLVRSGHVS
AGQVLAVTFTTRAAGEMRTRLRGLGVEAAQALTFHAAARRQLRYFWPRVVGDRPWDLLEN
KLRYVGQAANRAKLGTEVEILRDLASEIEWAKASLISPDDYPAVTARAQRDIPAPAAQVA
EVYRTYEELKNAAQVLDFDDLLLHTTAVLEEHGAVAEEFRERYRCFVVDEYQDVTPLQQR
LLDAWLGGRDDLTVVGDANQTIYSFGGASPRPLLEFTRRYPDATVVRLERDYRSTPEVVA
LANRVIGAARGRPAGSRLKLIGQRPPGPEPRFAEFDDEAVEAGAVARRVRELLDGGVSAS
EIAILYRVNAQSEAYESALAEAGIPYLVRGGERFFNRTEVRQAMSALRMASGDGSSDLVT
TVRSVLARVGLTESPPAGGAAKERWDALLAIVELAEELASTVADADLPRFCAELDQRAAA
QHPPTVEGVTLASLHAAKGLEWDAVFLVGLAEGTMPILHAGDDEAAIEEERRLFYVGVTR
AREHLWLSWALARTPGARRNRRRSRFLYGLVPEDHPAARAARSQQKPASPVKTRCRVCGG
PLLETIDIKLGRCGRCPSTVDEGLLERLKTWRGDRARELKVPTFVVFTDATLMAIAEQRP
ADEAALVSISGIGATKLERFGAEILGVVRASAES
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcgtactttccaccaagagcatcaaccgtctgctcgatggcctcgaccccgag
cagcgcgccgccgccagtgccccgcgggggccggtctgcgtgctcgccggcgccggcacg
ggcaagacccgcacgatcacccaccggatcgcccacctcgtccggtccgggcacgtttcc
gccggtcaggtcctcgccgtgacgttcacgacgcgggccgcgggggagatgcggacgcgg
ctgcggggcctcggcgtcgaagctgcgcaggccctgacgttccacgccgccgcccgccgg
cagctgcggtacttctggccgcgcgtggtcggcgaccggccgtgggacctgctggagaac
aagctgcggtacgtcggccaggccgcgaaccgggccaagctcggcaccgaggtcgagatc
ctgcgtgacctggcgagcgagatcgagtgggcgaaggcgtcgctgatcagcccggacgac
tacccggccgtcaccgcgcgcgcccagcgggacatcccggcgccggcggcgcaggtcgcc
gaggtgtaccgcacctacgaagaactgaagaacgccgcgcaggtgctcgacttcgacgac
ctcctgctgcacacgaccgcggtgctcgaggagcacggcgccgtcgccgaagagttccgg
gagcgttaccgctgcttcgtcgtcgacgagtaccaggacgtcacgccgctgcagcagcgc
ctgctcgacgcgtggctcggcggccgcgacgacctgaccgtcgtcggcgacgccaaccag
accatctactccttcggcggtgcgtcgccgcggccgctgctggagttcacccggcgctac
ccggatgccaccgtcgtccgcctcgagcgcgactaccggtcgacgcccgaggtcgtcgcg
ctggccaaccgggtgatcggcgcggcgcggggacggccggcgggctcgcggctgaagctg
atcggacagcggccgccggggccggagccgcgcttcgccgagttcgacgacgaggcggtc
gaggccggggccgtcgcccgccgggtgcgcgagctgctcgacggcggcgtctcggcgagc
gagatcgcgatcctctaccgggtgaacgcccagtccgaggcctacgagtcggcgctggcc
gaggccggcatcccgtacctggtccgcggcggcgagcggttcttcaaccggacggaggtc
cggcaggcgatgtccgcgctgcggatggcgagcggtgacggcagctccgacctggtcacg
acggtgcgttcggtgctcgcccgggtcggcctgaccgagtcgccgccggccggcggcgcg
gcgaaggaacgctgggacgcgctcctggcgatcgtcgaactggccgaagagctcgcttcg
acggtcgcggacgcggacctgccccgcttctgcgccgagctcgaccagcgcgccgccgcc
cagcacccgccgacggtcgagggcgtgacgctggcgtcgctgcacgcggcgaagggcctg
gagtgggacgcggtgttcctcgtcggcctcgccgagggcacgatgccgatcctgcacgcc
ggcgacgacgaagcggcgatcgaggaggagcggcggttgttctacgtcggcgtcacccgg
gcccgcgagcacctgtggctgtcctgggcgctggcccgcacaccgggcgcgcggcgcaac
cggcggcgcagccggttcctctacggcctggtcccggaggaccacccggccgccagggcc
gcgcggtcccagcaaaagccggcgtcgccggtcaagacgcgctgccgcgtctgcggcggg
ccgctgctggagaccatcgacatcaagctgggccgctgcgggcgatgcccgtccacagtg
gatgagggcctgctggagcggctgaagacgtggcgcggcgaccgggcgcgcgagctcaag
gtgccgacgttcgtggtgttcacggacgccacgctgatggccatcgccgagcagcgcccg
gccgacgaggcggcgctggtgtcgatctccggcatcggcgcgacgaagctcgaacgcttc
ggcgcggagatcctcggcgtcgtccgggcgtccgcggagtcttga
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