Amycolatopsis mediterranei RB: B737_1939
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Entry
B737_1939 CDS
T02804
Symbol
ffh
Name
(GenBank) signal recognition particle, subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz02024
Quorum sensing
amz03060
Protein export
amz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
B737_1939 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B737_1939 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B737_1939 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amz02044
]
B737_1939 (ffh)
Enzymes [BR:
amz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
B737_1939 (ffh)
Secretion system [BR:
amz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
B737_1939 (ffh)
Eukaryotic Sec-SRP protein
B737_1939 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
nSTAND3
TctA
Zeta_toxin
APS_kinase
ArsA_ATPase
MMR_HSR1
AAA_30
AAA_24
AAA_18
AAA_33
NPHP3_N
Lyase_catalyt
AAA_31
ParA
AAA_17
AAA_16
nSTAND_NTPase7
MobB
Thymidylate_kin
TsaE
SLFN-g3_helicase
NACHT
6PF2K
Motif
Other DBs
NCBI-ProteinID:
AGT82603
LinkDB
All DBs
Position
2102939..2104477
Genome browser
AA seq
512 aa
AA seq
DB search
MFDTLSDRLTAALQTLTRKGKLSDADIDATAREIRIALLEADVALGVVKTFIAKIKERAK
GAEVSQALNPAQQVIKIVNEELVGILGGETRRLNLAKTPPTVIMLAGLQGAGKTTLAGKL
ALWLKKQGHTPMLVACDLQRPNAVTQLQVVGERAGVVTFAPEPGNGVGDPVDVARRAIAE
AKHAQHDVVVVDTAGRLGVDEELMKQAADIRDAVEPDEVLFVVDAMIGQDAVTTAQAFQD
GVGFSGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDTFHPDRMASRILGMG
DVLTLIEQAEQAFDQKQAEKAAEKLSSGQLTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKDQLAQVDDKHLDKLQAIIRGMTPAEREDPKMINGSRRLRIANGSGVTVREVNDLVNRF
FEARKMMAQMAGRFGFGGGGGSSKRKGKKGKKGGRGPTQPKVRGGFPGGMPMLPPGGQMP
GGMPDLSQLGGMNDVPGFDPTKFKLPKNPKDN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctgtccgatcggctcaccgccgccctgcagacgctcacgcgcaagggc
aagctgtccgacgccgacatcgacgccaccgcgcgcgaaatccgcatcgcgctgctggag
gccgacgtcgccctcggcgtggtcaagaccttcatcgcgaagatcaaggagcgggcgaag
ggcgccgaggtctcccaggcgctcaaccccgcgcagcaggtcatcaagatcgtcaacgag
gagctcgtcgggatcctcggcggcgagacgcgccggctcaacctggccaagaccccgccg
accgtgatcatgctcgccggtctgcaaggtgccggtaagacgacgctggccggcaagctc
gcactgtggctgaagaagcagggccacacgccgatgctggtcgcctgcgacctccagcgc
ccgaacgccgtcacgcagctgcaggtcgtcggcgagcgcgccggcgtcgtcacgttcgct
cccgagccgggcaacggcgtcggcgacccggtcgacgtcgcccgccgcgccatcgccgag
gccaaacacgcgcagcacgacgtcgtcgtggtcgacaccgcgggccgcctgggtgtcgac
gaagagctgatgaagcaggccgccgacatccgcgacgcggtcgagccggacgaggtcctg
ttcgtcgtcgacgcgatgatcggccaggacgccgtgaccacggcgcaggcgttccaggac
ggcgtcggcttcagcggggtcgtgctcaccaagctcgacggcgacgcccgcggtggtgcc
gcgctgagcgtccgcgaggtcaccggccagccgatcctcttcgcctccaacggcgaaaag
ctcgaggacttcgacaccttccacccggaccggatggcgtcgcggatcctcggcatgggt
gacgtgctcaccctgatcgagcaggccgagcaggccttcgaccagaagcaggccgagaag
gccgccgagaagctctccagcggccagctcaccctggaggacttcctcgagcagatgctc
gcggtccgcaagatgggcccgatcggcaacctgcttggcatgctcccgggcgccggccag
atgaaggaccagctggcccaggtcgacgacaagcacctcgacaagctgcaggcgatcatc
cgcggcatgaccccggccgagcgcgaagacccgaagatgatcaacgggtcgcggcggttg
cgcatcgccaacggctccggcgtcaccgtccgcgaggtcaacgacctggtcaaccggttc
ttcgaggcccgcaagatgatggcccagatggccggccggttcggcttcggcggcgggggc
ggcagctccaagcgcaagggcaagaagggcaagaagggcgggcgcggcccgacccagccc
aaggtccgcggcggcttccccggcggcatgccgatgctgcccccgggcgggcagatgccg
ggcggcatgcccgacctctcgcagctgggcggcatgaacgacgtcccgggcttcgacccg
acgaagttcaagctgccgaagaaccccaaggacaattga
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