Amycolatopsis mediterranei RB: B737_3185
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Entry
B737_3185 CDS
T02804
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00020
Citrate cycle (TCA cycle)
amz00190
Oxidative phosphorylation
amz00650
Butanoate metabolism
amz00720
Other carbon fixation pathways
amz01100
Metabolic pathways
amz01110
Biosynthesis of secondary metabolites
amz01120
Microbial metabolism in diverse environments
amz01200
Carbon metabolism
Module
amz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amz_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
B737_3185 (sdhA)
00650 Butanoate metabolism
B737_3185 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
B737_3185 (sdhA)
00720 Other carbon fixation pathways
B737_3185 (sdhA)
Enzymes [BR:
amz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
B737_3185 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
GIDA
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AGT83849
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All DBs
Position
3484730..3486652
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AA seq
640 aa
AA seq
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MDGYRVGDPIADTKAPAGPLENRWDERKFAAKLVNPANRRRHRVIVVGTGLAGGSAGATL
AEQGYHVVQFCFQDSPRRAHSVAAQGGINAAKNYRNDGDSVYRLFHDTVKGGDFRARESN
VYRLAQVSAQIIDQAVAQGVPFAREYGGLLDTRSFGGVQVQRTFYARGQTGQQLLIGAYQ
ALSRQIDAGTVELHARTEMLDLIVADGRARGIVARDLVTGEITTHLADAVVLATGGYGNV
FYLSTNAKGSNATAIWRAHKRGAYFANPCFTQIHPTCIPRSGEHQSKLTLMSESLRNDGR
IWVPKRSGDTRSSGEIPEDERDYYLERLYPSFGNLVPRDIASRAAKNVCDAGFGVGPGGL
GVYLDFADAIARLGRPAVEARYGNLFDMYQRITAEDPYAVPMRIYPAIHYTMGGLWVDYD
LQSTIPGLFVIGEANFSDHGANRLGASALMQGLADGYFVLPATVNDYLGSTRLGDVPDAD
IRQVETEVRERISRLLAVRGTRSADSFHRELGLLMWDHCGMSRTREGLRKALDRVPELRA
EFWRDVRVPGGGAEFNQELEKANRVADFLELAELMLLDALAREESCGGHFREEHQTAEGE
ALRDDENFAFVAAWEYGAEPVLHRENLVFEHVHPTQRSYT
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggacggttaccgcgtgggcgacccgatcgccgacaccaaggcccccgccggtcccctc
gaaaaccgctgggacgagcggaagttcgccgcgaagctggtgaacccggcgaaccggcgc
cggcaccgggtgatcgtcgtgggcaccgggctggccggcggctcggccggcgcgacgctg
gccgagcagggttaccacgtcgtgcagttctgcttccaggactcgccgcggcgcgcgcac
tccgtcgcggcccagggcggcatcaacgcggcgaagaactaccgcaacgacggcgattcg
gtgtaccggctcttccacgacacggtcaagggcggcgacttccgggcccgcgagtccaat
gtgtaccggctggcccaggtctcggcgcagatcatcgaccaggccgtggcgcaaggggtg
ccgttcgcgcgggagtacggcggcctgctggacacccggtccttcggcggtgtgcaggtg
cagcggacgttctacgcgcgcggccagacgggccagcagctgctgatcggcgcgtaccag
gcgctgtcccggcagatcgacgccgggaccgtcgagctgcacgcgcgcaccgaaatgctc
gacttgatcgtcgccgacggccgggcccgcggcatcgtcgcgcgcgatctggtgaccggc
gagatcacgacgcacctcgcggacgccgtcgtgctcgcgaccggcggctacggcaacgtc
ttctacctctcgacgaacgcgaagggctccaacgccaccgcgatctggcgggcgcacaaa
cgcggcgcctacttcgcgaacccgtgcttcacccagatccacccgacgtgcatcccgcgg
tccggcgaacaccagtcgaagctgacgctgatgagcgagtcgctgcgcaacgacggccgc
atctgggtcccgaagcgcagcggcgacaccagatcatcaggggagatccccgaggacgag
cgcgactactacctcgaacgcctctacccgagcttcggcaacctcgtgccgcgggacatc
gcttcgcgggcggcgaagaacgtgtgcgacgccgggttcggcgtcggtcccggcggtctc
ggcgtctacctcgacttcgccgacgcgatcgcccgcctcggccgtccggcggtcgaagcc
cgctacggcaacctcttcgacatgtaccagcgcatcaccgcggaagacccgtacgcggtc
ccgatgcggatctacccggccatccactacacgatgggcggcctctgggtggactacgac
ctgcagagcacgatccccgggctgttcgtgatcggcgaggcgaacttctccgaccacggc
gccaaccggctcggcgcgtcggcgctcatgcaggggctcgccgacggctacttcgtgctg
cccgcgacggtcaacgactacctcggcagcacgcggctcggcgacgtccccgatgctgac
atccgccaggtggaaactgaggtgcgagaacggatttcccggctcctggccgtccggggg
acgcggtcggccgactcgttccaccgcgagctggggctgctgatgtgggaccactgcggg
atgtcccgcacccgcgaaggcctgcgcaaggcgctggaccgggtgccggagctgcgggcg
gaattctggcgtgacgtccgcgttcccggcggcggcgcggagttcaaccaggagctggaa
aaggcgaaccgggtggccgacttcctggagctggccgagctcatgctgctcgacgcgctc
gcccgcgaggaatcgtgcggcggccacttccgcgaagagcaccagaccgccgaaggcgaa
gccctgcgggacgacgagaacttcgccttcgtcgccgcgtgggagtacggcgccgagccg
gtgctgcaccgcgagaacctggttttcgagcacgtccacccgacccagcggagctacacg
tga
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