Amycolatopsis mediterranei RB: B737_3186
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Entry
B737_3186 CDS
T02804
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00020
Citrate cycle (TCA cycle)
amz00190
Oxidative phosphorylation
amz00650
Butanoate metabolism
amz00720
Other carbon fixation pathways
amz01100
Metabolic pathways
amz01110
Biosynthesis of secondary metabolites
amz01120
Microbial metabolism in diverse environments
amz01200
Carbon metabolism
Module
amz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amz_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
B737_3186 (sdhB)
00650 Butanoate metabolism
B737_3186 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
B737_3186 (sdhB)
00720 Other carbon fixation pathways
B737_3186 (sdhB)
Enzymes [BR:
amz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
B737_3186 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_7
Fer4_8
Fer4_10
Fer4_9
Fer4
Fer4_17
Fer4_6
Fer4_2
Fer4_18
Fer4_21
Fer4_4
Fer2
Fer4_15
Fer4_3
Fer4_13
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
AGT83850
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Position
3486649..3487395
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AA seq
248 aa
AA seq
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MKLTVRVWRQAGPAAEGRLVAYPVDGISPDMSFLEMLDVLNQRLIEAGDEPVAFDHDCRE
GICGSCGVVINGQAHGPERTTACQLHLRSFADGDVIDVEPWRAKGFPVVKDLVVDRSALD
RIVQAGGYVSAPTGSAPDAHATPVPKPDADLAFDNATCIGCGACVAACPNGSATLFTAAK
VTHLSLLPQGAPERASRVLDMVDAMDAEGFGGCTNTGECVASCPKGIPFTSIATLNREYL
AATRSGRR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcaccgtccgcgtctggcggcaggccgggccggccgccgagggccggctggtc
gcctacccggtcgacggcatcagcccggacatgtcgttcctggagatgctggacgtgctg
aaccagcggctgatcgaagccggcgacgaaccggtggcgttcgaccacgactgccgcgag
ggcatctgcggttcgtgcggcgtggtgatcaacgggcaggcacacggtcccgagcgcacg
acggcgtgccagctgcacctgcgctccttcgccgacggcgacgtcatcgacgtggaaccg
tggcgagccaagggcttcccggtcgtcaaggacctggtcgtcgaccgctcggcactcgac
cggatcgtccaggccggcgggtacgtcagcgcaccgacgggcagtgcgccggacgcccac
gccaccccggtccccaagccggacgcggacctggccttcgacaacgcgacctgcatcggc
tgcggcgcctgcgtggcggcgtgccccaacggctcggcgacgctgttcaccgcggcgaag
gtgacccacctcagcctgctgccgcagggcgcgccggaacgcgcgagccgggtgctcgac
atggtggacgcgatggacgccgagggcttcggcggctgcacgaacaccggcgagtgcgtg
gcgtcgtgcccgaagggcatcccgttcaccagcatcgcgacgctcaaccgcgagtacctc
gccgcaacccgctccggccgccgctga
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