Amycolatopsis mediterranei RB: B737_3393
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Entry
B737_3393 CDS
T02804
Name
(GenBank) RNA pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
amz
Amycolatopsis mediterranei RB
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amz03009
]
B737_3393
03016 Transfer RNA biogenesis [BR:
amz03016
]
B737_3393
Enzymes [BR:
amz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
B737_3393
5.4.99.29 23S rRNA pseudouridine746 synthase
B737_3393
Ribosome biogenesis [BR:
amz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B737_3393
Transfer RNA biogenesis [BR:
amz03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
B737_3393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
fvmRadSAM-pep
Motif
Other DBs
NCBI-ProteinID:
AGT84057
LinkDB
All DBs
Position
complement(3724508..3725443)
Genome browser
AA seq
311 aa
AA seq
DB search
MRRKLRPPIPPRHGLDPARLKLPDGEWPTLLAHLVDRLPRVAPDRIEEMLREERIHGTDG
PLGVDTPYAPGSFIWFHRDLPDEVPVPFAIDVVHRDEHLLVVDKPHFLATIPRGQHILET
ALVRLRRELDLPQLSPAHRLDRVTAGLVMFVITPESRGKYQTLFRDRRVHKEYEAIAPHD
PALTLPRTVRSRIVKERGVLAAQEVPGEPNAETYVDLLEHRAGLGRYRLVPATGRTHQLR
LHLSGLGVPILGDDFYPQLREKPLGDFTKPLQLLAKVLDFDDPLTGAHRRFTSARRLSAW
DDPEAWAAPPA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaagctccgcccgccgatcccgccccgccacgggctggaccccgcccggctg
aaactgcccgacggcgagtggccgaccctgctggcgcacctcgtcgaccggctgccgcgc
gtggcaccggaccgcatcgaggagatgctgcgcgaggagcgcatccacggcaccgacggc
ccgctcggcgtcgacacaccctacgcgcccggctcgttcatctggttccaccgcgacctg
cccgacgaggtgccggtgcccttcgcgatcgacgtcgtgcaccgcgacgagcacctgctc
gtcgtcgacaagccgcacttcctggcgaccatcccgcgcgggcagcacatcctggagacg
gcgctcgtgcggctgcgccgcgagctcgacctgccgcagctgtcccccgcgcaccgcctg
gaccgcgtcaccgcgggactggtgatgttcgtgatcacgccggagtcgcgcggcaagtac
cagacgctgttccgcgaccgccgggtgcacaaggagtacgaggcgatcgcgccgcacgac
ccggcactgaccctgccgaggaccgtccggagccggatcgtcaaggaacgcggggtgctc
gccgcccaggaggtgccgggcgaaccgaacgccgagacctacgtcgacctgctcgagcac
cgggccgggctcggccggtaccggctggtcccggccaccggccggacccaccagctgcgc
ctgcacctgagcggcctcggcgtcccgatcctcggcgacgacttctacccgcagctgcgc
gagaaacccttgggcgacttcacgaaacccctgcagctgctggccaaggtcctcgacttc
gacgacccgctgaccggcgcgcaccgccgcttcaccagcgcgcgccggctgtccgcgtgg
gacgatcccgaggcctgggcggcgccgcccgcgtga
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