Amycolatopsis mediterranei RB: B737_4382
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Entry
B737_4382 CDS
T02804
Symbol
pel
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00040
Pentose and glucuronate interconversions
amz01100
Metabolic pathways
amz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B737_4382 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B737_4382 (pel)
Enzymes [BR:
amz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B737_4382 (pel)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AGT85046
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All DBs
Position
4873149..4874435
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AA seq
428 aa
AA seq
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MRWKAFAGCLALLGLTLTAAPAQAHGRDPGRVVLGAHDGWAAATTGTTGGAAAAPADVHT
VTKRSELAAALAAHPGAPKIIYVRGTIEGNVDAADRPASCESFADPAYSLPAYLAAYDPA
TWGRVPPSGPLEEARARSQANQAKQVVLDVGPNTTIVGLGGHAVLHGLTLRVTGDNVILR
NLNFADAHDCFPQWDPLDTADGNWNSEYDNLDLVGATHVWVDHNEFSDGGNDRQPSYYGR
KYEVHDGLLDIVNGSDLVTVSYNRLHDHDKTMLIGNTDKPAYDVGKLRVTLHHNLFSEIG
QRAPRVRYGQVHVYDNLYLVPDPAAYTYSIGVGVESRIYAENNFFRIPAGLPLGQLVHYW
KGTVLHATGTLVAAGNQWPRPVDLLAEYNAANDPDLGPDVGWTPSFVERLDPTWAVPALV
LAGAGPGR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaaagctttcgcggggtgcctcgccctgctcggtttgacgctcaccgccgca
cccgcccaggcgcacggccgcgatcccggccgggtcgtgctcggtgcgcacgacggctgg
gccgccgcgaccaccgggaccaccggcggggcagccgccgcccccgccgacgtccacacg
gtgaccaagcgctccgagctcgcggccgcactggcggcgcacccgggcgccccgaaaatc
atctacgtccgcggcaccatcgagggcaatgtggacgccgcggaccggccggcgagctgt
gaaagtttcgccgacccggcctacagcctcccggcgtacctggcggcgtacgacccggcg
acgtgggggagagtgccgccgtcggggccgctggaggaggctcgcgcgcggtcgcaggcc
aaccaggcgaagcaggtcgtgctcgacgtcggcccgaacaccacgatcgtcgggctcggc
ggccacgccgtgctgcacgggctgaccctgcgcgtcaccggggacaacgtcatcctgcgg
aacctgaacttcgccgatgcccacgactgcttcccgcagtgggatccgctcgacaccgcc
gacggcaactggaactccgagtacgacaacctcgacctggtcggcgcgacgcacgtctgg
gtggaccacaacgagttcagcgacggcgggaacgatcggcagccgtcctactacgggcgc
aagtacgaggtccacgacgggctgctcgacatcgtgaacggctcggacctggtcacggtg
tcctacaaccggctgcacgaccacgacaagaccatgctgatcggcaacaccgacaagcct
gcttacgacgtcggcaagctgcgggtcacgctgcaccacaacctgttctccgagatcggc
cagcgcgcgccccgggtgcggtacggccaggtgcacgtctacgacaacctgtacctggtg
ccggatccggccgcctacacgtattcgatcggcgtgggcgtggagtcccggatctacgcg
gagaacaacttcttccggatccccgccggactgccccttggccagctcgtgcactactgg
aagggaaccgtgctgcacgcgaccggcacgctggtggcggcgggaaaccagtggccgcgg
ccggtggacctgctggcggagtacaacgcggccaacgatccggatctcgggccggacgtc
ggctggacgccgagcttcgtcgagcgcctcgaccccacgtgggcggtcccggcgctggtg
ctcgccggtgccggacccgggcgctga
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