Amycolatopsis mediterranei RB: B737_5236
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Entry
B737_5236 CDS
T02804
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B737_5236 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amz03400
]
B737_5236 (ruvB)
Enzymes [BR:
amz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B737_5236 (ruvB)
DNA repair and recombination proteins [BR:
amz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B737_5236 (ruvB)
RecFOR pathway proteins
B737_5236 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_16
AAA_5
Mg_chelatase
nSTAND3
AAA_3
Resolvase
AAA_14
IstB_IS21
Sigma54_activ_2
RNA_helicase
Cdc6_lid
HTH_AsnC-type
AAA_33
DUF815
Rad17
Zeta_toxin
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
AGT85900
LinkDB
All DBs
Position
complement(5886639..5887691)
Genome browser
AA seq
350 aa
AA seq
DB search
MEEEEALSAWVQTGEENVEGTLRPRKLDEFVGQPRVREQLELVLESARRRGVPPDHVLLS
GPPGLGKTSMAMIVAAELGAAIRITSGPALERAGDLAAMLSNLAPGDVLFIDEIHRIARP
AEEMLYLAMEDFRVDVVVGKGPGATSIPLEIAPFTLVGATTRSGSLTGPLRDRFGFTGQM
EFYTDAELELVVRRAATILDIPIDRDGCAEIAGRSRGTPRIANRLLRRVRDYAEVRADGK
VTRDVARAALAVYDVDELGLDRLDRAVLTALTRSFGGGPVGISTLAVAVGEEATTVEEVC
EPYLVRAGMLARTPRGRVATATAWEHLGLVPPADLPGRPDQGGPSLFEQD
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtggaggaagaagaagccctctcggcgtgggtccagaccggcgaagagaacgtcgagggc
acgctgcgcccgcgcaagctcgacgagttcgtcggccagccgcgtgtgcgcgagcagctg
gagctggtgctggagagcgcgcgccgccgcggcgtgccgcccgaccacgtcctgctgtcc
ggcccgcccgggctgggcaagacgtcgatggcgatgatcgtcgcggccgagctgggtgcg
gccatccggatcacctccggcccggccctcgagcgggccggcgacctcgccgcgatgctg
tccaacctcgcgcccggcgacgtcctgttcatcgacgagatccaccggatcgcccgcccc
gccgaggagatgctctatctcgcgatggaggacttccgggtcgacgtcgtcgtcggcaag
ggcccgggcgccaccagcatcccgctggagatcgccccgttcacgctggtcggcgcgacc
acccggtccggctcgctgaccggcccgctgcgggaccggttcggcttcaccggccagatg
gagttctacaccgacgccgagctggaactggtcgtccgccgggccgcgaccatcctcgac
atcccgatcgaccgcgacggctgcgccgagatcgccggccgctcgcggggcacgccccgg
atcgcgaaccggctgctgcggcgcgtccgcgactacgccgaggtccgcgccgacggcaag
gtgacccgcgacgtcgcccgcgccgcactggccgtctacgacgtcgacgagctgggtctc
gaccggctcgaccgggccgtgctcaccgcgctgaccaggtccttcggcggcggcccggtg
ggcatctcgacgctggcggtggccgtgggggaggaggcgaccaccgtggaagaggtctgc
gagccctacctcgtgcgcgccggtatgctcgcccgcaccccgcgcggccgggtcgcgacc
gcgaccgcgtgggaacacctcggcctggtgccgcccgcggacctcccggggcgcccggac
cagggcgggccgtcgctgttcgagcaggactga
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