Amycolatopsis mediterranei RB: B737_5711
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Entry
B737_5711 CDS
T02804
Name
(GenBank) OmpA-OmpF porin, OOP family
KO
K03286
OmpA-OmpF porin, OOP family
Organism
amz
Amycolatopsis mediterranei RB
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amz02000
]
B737_5711
Transporters [BR:
amz02000
]
Other transporters
Pores ion channels [TC:
1
]
B737_5711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
AGT86375
LinkDB
All DBs
Position
complement(6419650..6420882)
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AA seq
410 aa
AA seq
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MRVLIAGVFVGCPMAISAACGVDEPTCDETLPAYQAAAPDPGDPDSRLEVLVDHTADAPR
IKMPAELGEKLHDMLDAHTGGGRVLIDVGQIQGRSDGAAFWKQTNRVARYRTDVDADRDG
YVRRVLGCLDAWTSSLVPQQPDSSLLDALQKVSRQIGTEHGPVSVVAVSNGLDNTAPLDL
RVPLAGDATPESVAKMLAGDAEIPGLQGVDVQILELGQTSQGRRQMTEGEQRWIVSVWGE
ILKAAGVAKPRLERKSGDILDGAPANVPADAVFAAAPPQPKPPVGTGSVSLSAQALFDPN
SPVLAPAAEAVLRPYVTILQGPGAHATITGHTATWGPIPGRDLLSVQRAEAVRNYFIEQH
VPAEALAPARGVGSSEQVVNDIDPAGNLIEQAAQRNRRIVLDIVTPTKGR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgtcctcattgccggcgtcttcgtcggctgcccgatggcgatctcggcggcatgc
ggggtcgacgagccgacgtgcgacgagaccttgccggcctaccaggccgcggcgccggac
ccgggcgaccccgactcccgcctggaggtgctggtcgaccacaccgccgacgccccgcgc
atcaagatgcccgccgagctgggcgagaagctgcacgacatgctcgacgcgcacaccggc
ggcggccgggtgctcatcgacgtcggccagatccagggacgcagcgacggggcggcgttc
tggaagcagaccaaccgcgtcgcccggtaccgcacggacgtcgacgccgaccgcgacggc
tacgtgcgccgggttctcggatgcctcgatgcctggacctcctccctcgtcccccagcag
cccgacagcagcctgctcgacgcgctgcagaaagtcagccgccagatcggtaccgagcac
gggccggtcagcgtggtggccgtgtccaacgggctggacaacaccgcgccgctggacctg
cgcgtcccgctggccggcgacgccactccggaatcggtcgccaagatgctcgccggcgac
gccgaaatcccgggtctgcagggcgtggacgtgcagatcctcgagctggggcagacatcg
caggggcggcggcagatgaccgagggcgagcagcgctggatcgtctccgtctggggcgaa
atcctcaaggccgccggcgtggccaaaccgcggctcgaacgcaagtccggggacatcctc
gacggagcaccggcgaacgtgcccgccgacgccgtattcgccgcggcacctccgcagccg
aagccgccggtcggcaccggcagcgtgtcgctgtcggcgcaggcgctcttcgacccaaac
tcgcccgtgctggcgccggccgccgaagctgtgctccgcccgtacgtgacgatcctgcag
ggccccggcgcccatgccaccatcaccggtcacaccgccacctggggcccgatccccggc
cgggacctcctgtcggtccagcgcgccgaagcagtgcggaactacttcatcgagcagcac
gtcccggccgaggcgctggctcccgcccgcggtgtgggcagcagcgagcaggtcgtaaac
gacatcgacccggccggcaacctgatcgagcaggctgctcaacgcaaccgccggatcgtc
ctcgacatcgtcactcccacgaaaggacgctga
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