Amycolatopsis mediterranei RB: B737_6050
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Entry
B737_6050 CDS
T02804
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz03030
DNA replication
amz03410
Base excision repair
amz03420
Nucleotide excision repair
amz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B737_6050 (polA)
03410 Base excision repair
B737_6050 (polA)
03420 Nucleotide excision repair
B737_6050 (polA)
03440 Homologous recombination
B737_6050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amz03032
]
B737_6050 (polA)
03400 DNA repair and recombination proteins [BR:
amz03400
]
B737_6050 (polA)
Enzymes [BR:
amz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B737_6050 (polA)
DNA replication proteins [BR:
amz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B737_6050 (polA)
DNA repair and recombination proteins [BR:
amz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B737_6050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B737_6050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AGT86714
LinkDB
All DBs
Position
complement(6805072..6807720)
Genome browser
AA seq
882 aa
AA seq
DB search
MAYRAFFALPAENFKTKTGQVTNAVFGFTSMLINLLRDEAPTHLAVAFDLSRKTFRSETF
ADYKANRSTTPDEFRGQVDLVKEVLDVLGIPSLVKENFEADDIIATLTTQATADGFDVLI
CTGDRDALQLVTEHVTVLYPKRGVSEMTRFTPDAVEEKYGLTPRQYPDFAALRGDPSDNL
PSIPGVGEKTAAKWIKQFGSLDDLIDRVDEVKGKVGDALRAHLSSVQLNRQLTELIRDVE
LEIAPSGLELRPWDREAVHALFDELEFRVLRDRLFATLQSAEPEADEGFEVSGSALAPGA
LGAWLTAHASAGEPVALSFRAVGTSVRSDLRAIAFATADGEGAYVDVTAMDQADDAALAA
WLADPAIRKTGHDLKTPLHAIRARGWVLSGLAMDTALAAYLVRPGQRTFELDDLALRYLH
RELRSETDGGDGQLSLLDGGAEGLEQKEIQDELVKARAIFELAGALEKELEQIGGAKLLA
ELELPLLEVITELEIAGVAVDLEQLTTLEAHYLSRVTQAAEEAYAVIGKQINLGSPKQLQ
VVLFDELGMPKTKRTKTGYTTDAEALQGLFEKTEHPFLQHMLEHRDATKLRTTVEGLIKS
VADDGRIHTTLLQTIAATGRLSSTEPNLQNIPVRTEEGRRIRDAFVVGEGFTELMTADYS
QIEMRIMAHLSQDEGLIEAFNSGEDLHTFVASRAFSMPPEEITPELRYRVKAMSYGLAYG
LSAYGLSQQLRISTEDAKSQMEAYFDRFGGVRDYLHSVVGVAAKNGYTETVFGRRRYLPD
LNSDNRQRREMAERMALNAPIQGSAADIIKVAMLNVHRALVEAKLKSRILLQVHDELVLE
VAEGEKEQLEQLVREGMGSAYALAVPLEVSVGYGRSWNEAAH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccgcgcgttcttcgccctgcccgcggagaacttcaagaccaagaccggtcag
gtcacgaacgcggtcttcggcttcacctcgatgctcatcaacctcctgcgcgacgaagcg
ccgacccacctggcggtggcgttcgacctctcgcgcaagacgttccgctcggagaccttc
gccgactacaaggcgaaccgcagcaccacgccggacgagttccgcggccaggtggacctg
gtcaaagaggtcctcgacgtgctcggcatcccgtcgctggtgaaggagaacttcgaggcc
gacgacatcatcgccacgctcaccacgcaggcgacggccgacggcttcgacgtcctcatc
tgtaccggcgaccgcgacgcgctgcagctggtcaccgagcacgtcaccgtgctgtacccg
aagcgcggcgtctcggagatgacccggttcaccccggacgccgtcgaagagaagtacggg
ctcaccccgcggcagtacccggacttcgccgcgctgcgcggcgacccctcggacaacctg
ccgagcatccccggtgtcggcgagaagaccgcggccaagtggatcaagcagttcggctcg
ctcgacgacctgatcgaccgcgtggacgaggtcaagggcaaggtgggcgatgcgctgcgg
gcgcacctgtcctcggtccagctcaaccgccagctgaccgagctgatccgggacgtcgag
ctggagatcgcgccgtccgggctggagctgcgcccgtgggaccgcgaggcggtgcacgcg
ctgttcgacgagctggagttccgcgtgctgcgcgaccggctgttcgcgacgctgcagagc
gccgagccggaggccgacgaaggcttcgaggtctcgggttccgcgctcgcacccggtgcg
ctgggcgcgtggctgaccgcgcacgcgagcgcgggcgagccggtggccctgtccttccgc
gcggtgggcacgtcggtccggtccgacctgcgcgcgatcgccttcgcgacggccgacggt
gaaggcgcgtatgtcgacgtcacggcgatggaccaggccgacgacgcggcgctcgccgcc
tggctggccgacccggccatccgcaagaccggccacgacctcaagaccccgctgcacgcg
atccgcgcccgcggctgggtcctctcggggctcgccatggacaccgcgctggccgcctac
ctggtgcggcccgggcagcgcacgttcgagctggacgacctcgcgctgcgctacctgcac
cgcgagctgcgctcggagaccgacggcggcgacgggcagctgtcgctgctcgacggcggc
gcggaaggcctggagcagaaggagatccaggacgagctggtcaaggcccgcgcgatcttc
gagctggccggcgcgctcgagaaggagctcgagcagatcggcggcgcgaagctgctcgcc
gagctggagctgccgctgctggaagtgatcaccgagctggagatcgccggcgtcgccgtc
gacctcgagcagctgaccacgctggaggcgcactacctttcgcgcgtcacgcaggccgcc
gaagaggcgtacgcggtgatcggcaagcagatcaacctcggctcgccgaagcagctgcag
gtcgtgctgttcgacgagctcggcatgccgaagaccaagcgcaccaagaccggctacacc
accgatgccgaggcgctgcagggcctgttcgagaagaccgagcacccgttcctgcagcac
atgctggagcaccgggacgcgacgaagctgcgcacgacggtcgagggcctgatcaagtcc
gtcgccgacgacgggcgcatccacaccacgctgctgcagacgatcgcggccaccgggcgg
ctgtcctcgaccgagccgaacctgcagaacatcccggtccgcaccgaagaaggccgccgc
atccgtgacgccttcgtcgtcggcgagggcttcaccgagctgatgaccgcggactacagc
cagatcgaaatgcggatcatggcgcacctttcgcaggacgagggcctcatcgaggcgttc
aactccggcgaggacctgcacacgttcgtcgcgtcgcgagcgttctcgatgccgccggag
gagatcacgccggagctgcgctaccgcgtcaaggcgatgtcgtacgggctcgcgtacggg
ttgtcggcgtacgggctttcgcagcagctgcggatttccaccgaggacgccaagtcccag
atggaggcgtacttcgaccgcttcggcggggtgcgcgactacctccactcggtcgtcggc
gtcgcggcgaagaacgggtacaccgaaacggtcttcggccgccgccgctacctgccggac
ctcaacagcgacaaccgccagcgccgcgagatggccgagcggatggcgctcaacgccccg
atccagggcagcgcggccgacatcatcaaggtcgcgatgctcaacgtccaccgcgcgctg
gtcgaggcgaagctgaagagccggatcctgctgcaggtccacgacgaactggtcctggaa
gtcgccgaaggcgagaaggagcagctggagcagctggtgcgcgagggcatgggctcggcg
tacgccctggcggtgccgctcgaggtgtcggtcggctacgggcggtcgtggaacgaagcc
gcacactga
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integrated database retrieval system
