KEGG   Amycolatopsis mediterranei RB: B737_6969
Entry
B737_6969         CDS       T02804                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
amz  Amycolatopsis mediterranei RB
Pathway
amz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B737_6969 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amz03400]
    B737_6969 (alkA)
Enzymes [BR:amz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     B737_6969 (alkA)
DNA repair and recombination proteins [BR:amz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     B737_6969 (alkA)
SSDB
Motif
Pfam: AlkA_N
Other DBs
NCBI-ProteinID: AGT87632
LinkDB
Position
complement(7831130..7832035)
AA seq 301 aa
MTTISRPCAELAVQGEFDLAAAARFLTGFAPAGQPDSEPGALRVAFALDGEWTPVGAVLR
QRSPGEVTVEVHGPPEHTDAVVAQARRMCSLDVDGTAFPEAGARDPVVSLLQGLHPGLRP
VLFASPYEAACWAVLSHRIWMTQAVRLRRRLTERYGTEVDVGGSRLRAFPAPAALAKMEY
QPGLPGPKIPRLRAIAEAAADGMLDAAALRAMPAEEALKRLQLLPGVGRFSAELILIRGA
GHPDVFPRSETRLHEIMRDAYHLPDAGVAELAEIAEAWAPFRSWVSFLFRVEGEARMRES
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacgacgatttcccgaccgtgcgccgagctcgcggtacagggcgagttcgacctggcc
gcggcggctcgcttcctgaccggcttcgccccggcgggccagccggactccgaaccgggc
gcgctgcgggtggcgttcgcgctcgacggcgaatggacgccggtgggagcggtgctgcgg
cagagatcgcccggcgaggtcacggtggaggtccacgggccgcccgagcacaccgacgcc
gtggtggcacaggcgcggcggatgtgttcgctggacgtcgacggcacggcgttcccggag
gccggcgcccgtgatccggtggtttcgctgctgcaggggttgcatccgggcctgcgtccg
gtcttgttcgcgtcgccgtacgaggcggcgtgctgggccgtgctgagccaccggatctgg
atgacgcaggcggtccggctgcgccgtcgcttgaccgagcgctacggcaccgaggtcgac
gtgggcgggagcaggctgcgggcgttcccggcgccggccgcgctggcgaagatggagtat
cagccggggctgccgggcccgaagatcccgcgcctgcgagccatcgccgaggcggcggcc
gacggaatgctggacgcggcggcgttgcgggcgatgccggcggaggaggcgctgaagcgg
ttgcaactgctgccgggcgtcggccggttcagcgcggagctgatcctgatccgcggcgcc
ggccacccggacgtcttcccccgcagcgaaacccgcctccacgagatcatgcgcgacgcg
taccacctcccggacgcgggcgtcgcggagctggcggagatcgcggaagcctgggcgccg
ttccgcagctgggtgtcgttcctgttccgggtcgagggcgaggcccggatgcgggagtcg
cgatga

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