Amycolatopsis mediterranei RB: B737_6974
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Entry
B737_6974 CDS
T02804
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B737_6974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amz03019
]
B737_6974
03009 Ribosome biogenesis [BR:
amz03009
]
B737_6974
Messenger RNA biogenesis [BR:
amz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B737_6974
Ribosome biogenesis [BR:
amz03009
]
Eukaryotic type
Pre-60S particles
RNases
B737_6974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGT87637
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All DBs
Position
7836978..7837553
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AA seq
191 aa
AA seq
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MTGLDLGKEALIEIAALVTDAELNVLGDGVDIVIHADEEKLAGMPEIVREMHAHSGLTEE
VRRSTVTLEEAERRVLDYIREHVPEPGTAPLAGNSIATDRGFIARDMPALDAHLHYRMVD
VSSVKELVRRWYPRIYYAKPEKGLAHRALADIRESIGELDYYRRVAFVPQPGPTSEEAKA
AAAEVQEQHQR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgacggggctcgacctcggcaaagaagcgttgatcgaaatcgccgccctcgtcaccgac
gcagaactgaacgtgctcggcgacggagtcgacatcgtcatccacgccgacgaggaaaaa
ctcgccgggatgcccgaaatcgtccgcgagatgcacgcccactccggcctcaccgaagaa
gtccgccgctccacggtgaccctcgaagaagccgaacgccgcgtcctcgactacatccgc
gagcacgtccccgaaccgggcaccgcgcccctcgccggcaactccatcgccaccgaccgc
ggcttcatcgcccgcgacatgccggccctcgacgcccacctgcactaccgcatggtcgac
gtctcctccgtcaaggaactcgtccgccgctggtacccgcgcatctactacgccaagccc
gagaagggcctcgcccaccgcgccctcgccgacatccgcgaatccatcggcgaactcgac
tactaccggcgcgtcgccttcgtcccccaacccggccccaccagcgaagaagccaaggcc
gccgccgctgaagtgcaggaacagcaccaaaggtga
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