Amycolatopsis mediterranei RB: B737_7186
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Entry
B737_7186 CDS
T02804
Name
(GenBank) Rhs family protein
Organism
amz
Amycolatopsis mediterranei RB
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RCC1
RCC1_2
DUF6531
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
AGT87847
LinkDB
All DBs
Position
complement(8053422..8058020)
Genome browser
AA seq
1532 aa
AA seq
DB search
MGQLGNGTTIDAKTPAQVSGLTSSTAIASGLYTGYAVKSDGTAWAWGYNTYGGLGDGTTT
DRSTPVRVGTLTNVIAVAGGSFTGYALKSDGTVWAWGNGYDGELGNGGTADSHTPVRVGS
LTGVTAIAGSGGNGYALKSDGTVWSWGINSSGQIGDGTTTTRLAPVQVKNLPGVSAIAAA
SGSETAYAVKSDGTVWSWGDNASGQLGNGSTAANTSTAVQVKNFTGATAIAGGLSDGYAL
KSDGTVWSWGDGSYGQLGNGGTTQSAVAVQVSGLTGIAAIAAGGHSAYATRADGTARSWG
SNSNGQLGNGTTTNAKTPVVVSTLTSVIAVAANYNSAYALAGGTIPAAGAVPPRQLPGDG
NPCLPCPLVQSGTGSGGDPVDTSSGAFHERYTDLSVAGRGPGLVWARSYNSVMAADDGPL
GYGWHTGYGARLITNATTGAITVSQENGAEVVFTNSSGTYTAPARVQATLVKNADGTYTF
TRHATQILRFDSAGHLTAIADLNGEKTALTYAGALLSKVTDSAGRALTVTYTGTHISKVS
DPLGNAYTYAYDSAGNLTTVTAPDGGVTTFGYDSAHRVTSVLDPAQQSATTKHPTTNVYD
AKSRVTTQTDALGRVTTFVYTGDPYSSAGGTTVVLDPAGHQTADIYQYGIRVSNVRGFGT
AAAVTTNYTYDKTTLAPTETTRTTAGDPNAHRTTATYDTKGNPTAQVDGLGREVDTTYNA
FNEPLTKTEPNPSSVGPARITTTYAYDSKGNLVSKSRPLYTSATASTNQTVTYRHDASTH
PGDVTGAVDPLGKITTTTYDSAGNVATVTTPQGRTTTHTYDADGHRITTIAPQGAVSGAD
PAAYTTTFGYDTNGRPTSTSVAAPGGPLVTSQAYDLDGRLTSSTDPLGRVSHNTYDLAGE
LITATQPDGSTRQTTYWPDGTVKTRVDGLGKITSYGADTLGRVASVTDPLNRVTTYTYDA
ADAVLITTDPQNQVTTNVYDAAGQLLTTTYSDGVTPKVTRTYNAGGLAATIVDGSGTTTS
AYDSLGRLTSQSVAGQTVGYGYDPAGRVTTLTYPNGKNVTRTYDGDGSLTGVSDWLGGAS
TFGYDGGGRLATTTVPNGITTTIGHDAPGRTTGITLANGGTTLGSLTDTWDTAGQLSSET
SAGLGADRAFGYDTDGRLTTDTDTAYAYDSAGQLTSNAGTTQAYDAAGQLTGAYTFDQRG
NRTVAGTTAYSYDQANRLTSYTADATAAVYGYNGDGLRTTKKVGTTTSTFAYDTVEGLPL
LLADGTNFYLYGPGGTPIEQIGATSGTPTYLHADQLGSVRVLTAADGTVANTATYTAYGV
RTFGTAGGTTTPFGFAGQYTDAESGLLYLRARYYDPATGQFLTRDPALPLSGSVYGYADG
DPIGRKDPSGLWTGGICFTSHLGGLVFWSGQVCIQIDGHGDLGVTGTMAGGGSTPGLGAG
VGLQGSNADQIKDLNGLFCTAGFSAGAPYFGGADFSWGTDSQGRPVYVGELSGGVGAEGL
PFPAEVHGGVSDTWSASFSIPKVWNWLTSLFD
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgggccaactgggcaacggaaccacgatcgacgccaagacgccggcccaggtcagcggg
ctgacctcgagcaccgcgatcgcgtccggcctgtacaccgggtacgcggtcaaatccgac
ggcaccgcctgggcgtggggttacaacacctacggcggtctcggcgacggcaccaccacc
gaccgctcgacaccggtccgcgtcggcacgctgaccaacgtgatcgcggtcgccggcggc
tcgttcacgggctacgcgctcaagtccgacggcaccgtttgggcctggggcaacggctac
gacggtgaactcggcaacggcggcacggccgacagccacaccccggtgcgggtgggctcg
ctgaccggcgtcacggcgatcgcgggctcgggcgggaacggctatgcgctcaagtcggac
ggcaccgtgtggtcgtggggcatcaactcaagtggccagatcggtgacggcacgacgacc
acccgcctcgcgcccgtccaggtcaagaatctgcccggcgtcagtgccatcgccgcggcg
agtggctccgaaacggcgtacgcggtgaagtccgacggcacggtgtggtcctggggcgac
aacgccagcggccaactcggcaacgggtccaccgccgccaacaccagcaccgccgtgcag
gtgaaaaacttcaccggagcgaccgcgatcgccggcggcctttccgacggctacgccctc
aaatccgacggcacggtgtggagctggggtgacggctcctacggccagctgggcaacggc
ggcaccacacagagcgccgtcgcggttcaggtcagcggcctgaccggcatcgccgcgatc
gccgcgggcggccattcggcctacgcgacccgtgccgacggcacggcgcgttcctggggc
agcaactccaacggccagctgggcaacggcaccacgaccaatgcgaaaacgccggtggtg
gtcagcacgctgacctcggtgatcgcggtggccgccaactacaacagcgcatacgcgctg
gcgggcggcacgatccccgccgcgggcgcggtgccgccccggcagcttcccggcgacggc
aacccgtgcctgccgtgcccgctcgtgcagtccggcaccggctcgggcggtgacccggtg
gacacctcgtccggggcgttccacgagaggtacaccgatctgtcggtagccggccgcggt
cccggcctcgtctgggcccggtcgtacaactccgtgatggctgccgacgacgggccgctc
ggctacggctggcacaccggctacggcgcccgcctgatcaccaacgcgaccaccggcgcc
atcacggtcagccaggaaaacggtgccgaggtggtgttcaccaactcttcgggcacctac
accgctcccgcccgcgtccaggcgaccctggtcaagaacgccgacggcacgtacaccttc
acccgccacgccacccagatcctgcgcttcgactcggcgggccacctgaccgcgatcgcc
gacctcaacggcgaaaagaccgcgctgacctacgccggcgcactgctgtcgaaggtgacc
gacagcgccggccgggcgctgacggtgacctacaccggcacgcacatcagcaaggtctcc
gacccgctcggaaacgcctacacctacgcctacgactcggcaggcaacctcaccaccgtg
accgcgcccgacggcggcgtcacgacgttcgggtacgacagcgcgcaccgggtcacctcg
gtgctggacccagcacagcaaagcgcgacgaccaagcaccccaccaccaacgtgtacgac
gccaagagccgcgtcaccacccagaccgacgcgctgggccgggtgaccaccttcgtctac
accggcgacccgtacagctccgccggtggcacgaccgtcgtcctcgatcccgccggccac
cagactgccgacatctatcagtacggcatccgcgtctcgaacgtccgcggcttcggcacc
gcggccgccgtcaccaccaactacacctacgacaagacgaccctcgcgccgaccgagacc
acccgaaccaccgcgggcgacccgaacgcccaccggaccaccgcgacctacgacaccaag
ggcaacccgaccgcccaggtcgacggcctcggccgggaagtcgacacgacctacaacgcg
ttcaacgagccgctcaccaagaccgagccgaacccgtcgtccgtcggaccggcccggatc
accaccacctacgcctacgacagcaagggcaacctggtgagcaagagccggccgctctac
acatcggcgacagcctccaccaaccagacggtgacctaccgacacgacgccagcacgcac
cccggcgacgtgaccggcgccgtcgacccgttgggcaagatcaccacgacgacctacgac
agcgcgggcaacgtcgccaccgtcacgacaccgcagggccgcaccaccacccacacctac
gacgcggacgggcatcggatcacgacgatcgccccgcaaggagccgtcagcggtgccgac
ccggccgcgtacacgaccactttcgggtacgacaccaacggccggcccacctcgaccagc
gtcgccgcgcccggcggtccgctggtcaccagccaggcctacgacctcgacggccggctc
accagcagcactgatccgctcggccgcgtcagccacaacacctacgacctggccggcgag
ctgatcacggcgacccagccggacggcagcacccggcagaccacctactggcccgacggc
acggtcaagacgcgggtcgacgggctcggcaagatcacctcgtacggggccgacacgctg
ggccgggtcgcctcggtcaccgacccgctcaaccgcgtcacgacgtacacctacgacgcc
gccgacgcggtgctgatcaccaccgacccgcagaaccaggtcaccaccaacgtctacgac
gccgccgggcagttgctgaccaccacctactcggacggcgtcacgcccaaggtgacccgc
acgtacaacgccggcgggctcgcggccacaatcgtcgacggcagcggcaccaccacctcg
gcgtatgacagcctcggccggctcaccagccagtcggtggcgggccagaccgtcggatac
ggctacgacccggccggccgggtcaccaccctcacctaccccaacggcaagaacgtgacc
cgcacctacgacggggacggctccctgaccggcgtgtccgactggctcggcggcgccagc
accttcggctacgacggcggcggccggctcgccacgacgacggttcccaacggcatcacc
acgacgatcggccacgacgctcccggccggaccaccggcatcacgttggcgaatggcggc
accacgctgggcagcctgaccgacacgtgggacacggccggtcagctgagcagcgagacg
tcggccgggctcggggccgaccgagccttcggctacgacacggacggccggctcaccacc
gacaccgacaccgcgtacgcctacgacagcgccggccagctcacctcgaacgcgggaacc
acccaggcgtacgacgcggcgggccagctgaccggggcgtacaccttcgaccagcggggc
aaccggaccgtggccgggaccaccgcctactcctacgaccaggccaaccggctcacctcg
tacaccgccgacgcgaccgccgccgtctacggctacaacggtgacggcctgcgcacgacc
aagaaggtcggcacgaccaccagcacgttcgcctacgacacggtggaggggctgccgctg
ctgctcgcggacggcacgaacttctacctgtacggtccgggcggcaccccgatcgagcag
atcggcgccacctccggtacgcccacctacctgcatgccgaccaactcggcagcgtccgg
gtgctgaccgcggcggacgggacggtcgccaacaccgccacctataccgcctatggcgtg
cgaacgttcggcaccgccggcggcacgacgacgccattcggcttcgccggccaatacacc
gacgccgaaagcggcctgctttacctgcgagcccgctactacgacccggcgaccggacag
ttcctcacccgcgacccggcattgccgctgtccggttccgtctacgggtacgccgacggc
gacccgatcggcaggaaggatccgtccggcctgtggaccggtggcatctgcttcacctcg
cacctcggcggtctcgtcttctggtccggtcaggtgtgcatccagatcgacggccacggc
gatctgggcgtcaccggcacgatggccggcggcgggtccactcccgggctcggcgccggc
gtggggctccagggcagcaacgccgaccagatcaaggacttgaacggcctgttctgcacg
gcgggctttagcgccggtgcaccctacttcggcggggcggacttctcctggggcaccgac
agccagggtcgtccggtgtatgtcggggagctgagcggcggcgtgggcgccgaggggctg
ccgtttccggccgaggtacacggcggcgtgtccgacacgtggtcggcgtcgttcagcatc
ccgaaggtctggaactggctgacgagtctgttcgactga
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