Amycolatopsis mediterranei RB: B737_8296
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Entry
B737_8296 CDS
T02804
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amz
Amycolatopsis mediterranei RB
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amz03400
]
B737_8296 (phrB)
Enzymes [BR:
amz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
B737_8296 (phrB)
DNA repair and recombination proteins [BR:
amz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
B737_8296 (phrB)
Prokaryotic type
B737_8296 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGT88957
LinkDB
All DBs
Position
complement(9272406..9273752)
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AA seq
448 aa
AA seq
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MTREAPVVLWFRRDLRLGDHAALLEASRHSKHVLALYVLDEALLKPGGAPREAFLYGCLE
KLNEQLGGRLMLVRGEPAAEVVKAAKKIGAAAVHVSADTGPYGRRRDASVAKALAEHNIE
WVETGSSYAVTPGRVTKPDGSPYRVFTPFFRAWTARGWHSPADTGPSLVDWVEPPRSLKI
PKAPAVSATLPEPGEQAALDVWHEFLDDGIETYDEDRDRPDREGTTRLSPYLRWGCIHPR
TILADLAGDDRVGAKSLRSEICWREFHADVLWHRPETARENYDHRFDGMKYDDDREAFER
WCAGRTGYPIVDAGMRQLLAEGWMHNRVRMVVASFLVKDLHLPWWLGARHFMKHLVDGDL
ASNQLNWQWVAGCGTDAAPYFRIFNPTTQGEKFDPAGDYVRKYVPELRSVPGKAVHQLKD
RPEGYPEPMVDHAHERQVSLERYGKITS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgactcgagaagcgccggtcgtcctgtggttccgccgtgacctgcggctcggcgaccac
gccgcgctgctggaggcgtcgcgccacagcaagcacgtgctcgcgctgtacgtcctcgac
gaagcactgctgaagcctggtggcgcgccgcgggaagcgttcctctacggctgcctggag
aagctgaacgagcagctcggcggccggctgatgctggtccgcggcgaaccggcggccgaa
gtcgtgaaggcggcgaagaagatcggtgcggccgcggtgcacgtcagcgccgacaccggg
ccctacggtcgccgccgggacgcttcggtggcgaaagcgttggcggagcacaacatcgag
tgggtcgagacgggctcgtcgtatgccgtgacgccgggccgcgtcaccaagccggacggc
agcccgtaccgcgtcttcacgccgttcttccgcgcctggaccgcccgcggctggcattca
cccgccgacaccggtccgtcccttgtggactgggtggaaccgccgcggtcgctgaagatc
ccgaaggcgcccgccgtctccgcgacgctgcccgagcccggcgagcaggccgcactcgac
gtctggcacgaattcctggacgacggcatcgagacctacgacgaggaccgcgaccggccg
gaccgtgaaggcaccacccggctgtcgccgtacctgcgctggggctgcatccacccgcgg
acgatcttggccgacctggcgggtgacgaccgcgtcggcgcgaagtcgctgcgcagcgag
atctgctggcgcgagttccacgccgacgtcctgtggcaccgcccggaaaccgcgcgtgag
aactacgaccaccgcttcgacgggatgaagtacgacgacgaccgcgaggccttcgagcgg
tggtgcgcgggtcgcaccggttacccgatcgtggacgccgggatgcggcagctgctggcc
gagggctggatgcacaaccgggtgcggatggtcgtcgcgagcttcctggtgaaggacctg
cacctgccgtggtggctgggcgcccgccacttcatgaagcacctggtggacggcgacctg
gcgtcgaaccagctgaactggcagtgggtcgcgggctgcggcaccgacgcggcaccgtac
tttcgcatcttcaacccgacaacccagggcgagaagttcgacccggccggcgactacgtg
cgcaagtacgtgccggagctgcgctcggtgcccggcaaggcagtgcaccagctgaaggac
cgccccgagggatacccggaacccatggtcgaccacgcccacgagcgccaggtgtccttg
gaacggtacggcaagatcacctcgtga
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