Nostoc sp. PCC 7120: all3853
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Entry
all3853 CDS
T00069
Name
(GenBank) group 3 sigma 37-type sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ana
Nostoc sp. PCC 7120
Brite
KEGG Orthology (KO) [BR:
ana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ana03021
]
all3853
Transcription machinery [BR:
ana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
all3853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_3
HTH_24
HTH_Crp_2
KORA
HTH_23
Sigma70_ECF
HTH_17
HTH_Tnp_ISL3
HTH_8
HTH_Tnp_4
Tri-helical
GerE
MarR_2
HTH_31
HTH_11
HTH_28
Xre-like-HTH
HTH_AsnC-type
HTH_30
AbiEi_4
Trp_repressor
HTH_38
HTH_37
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
BAB75552
LinkDB
All DBs
Position
complement(4649618..4650394)
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AA seq
258 aa
AA seq
DB search
MPTTATNELKYEIWQLLREYQQSRSETVRNQLVKLNLGLVRKEAHYWMNQCRENYDDLVQ
VGCLGLIRAIERFEIAKGHAFSSFAIPYIRGEIQHYLRDKGVTVRIPRRYLAIQQRAIGV
SRSLREQYNRQPTDSELATALEISPDEWQEIKLAWVNRAPLSLDVPVQDGEEGATSLGEL
VPDHHYRSFQLAQEDQIRLQQALFQLEQRTREVLECVFLQDLTQKQVAEHLGISVVTVSR
RVKKGLDLLKHLMCVADD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacagctaccaacgaattgaagtatgaaatttggcagttgttacgagaatat
cagcaatctcgatcagaaactgttcgtaatcaactagtaaaactgaatcttggattagtg
aggaaagaagctcactactggatgaatcaatgccgggaaaactatgatgatttggttcaa
gttggttgtttaggtttaatcagagcgattgaaagatttgaaattgccaaaggccatgct
tttagctcctttgccataccttatatccgtggcgaaattcaacactacctccgcgataaa
ggtgtaacagtaagaattcctcgtcgctacttggcgatacaacagcgagcaatcggagtt
tcgcgttctttgcgggaacaatacaaccgccaaccaactgactcagaattagcaacagca
ctggaaatttccccagatgaatggcaggaaatcaaattagcgtgggtaaaccgcgctcct
ttgagtttagatgtacccgtgcaagatggtgaagaaggagccactagcctgggagaattg
gttcctgatcatcattaccgcagttttcagttggcacaagaagaccaaattcgcttacaa
caagcattgtttcagttagaacaacgcactcgtgaagttttagagtgtgtgtttttacaa
gacttaacgcagaaacaggtggcagaacacttaggaatcagcgtcgtcacagtttccagg
agagtaaaaaaagggttggacttgttaaagcatctgatgtgtgtggcagatgattaa
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