Nostoc sp. PCC 7120: all4191
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Entry
all4191 CDS
T00069
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ana
Nostoc sp. PCC 7120
Pathway
ana03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ana00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
all4191 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ana03021
]
all4191 (rpoA)
03400 DNA repair and recombination proteins [BR:
ana03400
]
all4191 (rpoA)
Enzymes [BR:
ana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
all4191 (rpoA)
Transcription machinery [BR:
ana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
all4191 (rpoA)
DNA repair and recombination proteins [BR:
ana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
all4191 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BAB75890
UniProt:
Q8YPK3
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(5038362..5039309)
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQIECVESNTEESRNHYSKFILEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVPGVREDVLEIIMRMKEVILKSYSSQAQIGRLLVNGPTTITASHFDLPSEVEV
IDPTQYVATIAEGGKLEMEFRIERGKGYRTVERGREEATSLDFLQIDSIFMPVRKVNYSV
EEVRADGSIPKDRLLLEVWTNGSISPQEALSSAAGILVDLFNPLKDISLEPTDTNSDIPD
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDYTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPQERSSKHN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgaatgtgtagagtctaatacagaggaaagtcggaaccattac
agtaaatttattctagaacctctagaacgtggtcagggaacaacagtcggcaatgcgttg
cggcgggttttactatccaatctagagggaacagcagtcacagcagtgagaattgccggt
gtttctcacgagtttgctacagttccaggcgtgcgagaagatgtcttagagatcatcatg
cggatgaaggaagttatcctcaaaagctattcttctcaggcccagatcggcagattgcta
gttaacggcccaacaacaatcactgcatcacattttgatttacccagtgaagtagaagtt
attgatcctacccagtatgtcgctactattgctgagggcggcaaattggaaatggagttc
cgcatcgaaagaggcaaaggataccgcacagtagaaagagggcgtgaagaagctacatct
ttggactttctgcaaattgactccatctttatgcctgtgcggaaagttaactacagtgtt
gaggaagtgcgtgctgatggctccattcctaaagacaggcttctgttagaagtttggaca
aatggtagcatttctcctcaagaagccttatcttcagcagccgggattctagttgatttg
ttcaatccgttgaaagatatttcactagaaccaacggatacaaactccgacattccagac
gaccccactgctcaaattcctatcgaagagttgcaactctctgtacgggcctataactgt
ctcaagcgggcgcaagtcaactctgtggctgacttgttggattacacccaagaagacttg
ttagagatcaaaaacttcggtcagaaatcagcagaagaagtcgtggaagctttacagcga
cgcttgggcatcaccttaccccaagaaagaagctctaaacacaactag
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