Nostoc sp. PCC 7120: all4450
Help
Entry
all4450 CDS
T00069
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ana
Nostoc sp. PCC 7120
Brite
KEGG Orthology (KO) [BR:
ana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ana03016
]
all4450
Enzymes [BR:
ana01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
all4450
Transfer RNA biogenesis [BR:
ana03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
all4450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
BAB76149
UniProt:
Q8YNW1
LinkDB
All DBs
Position
complement(5336086..5338146)
Genome browser
AA seq
686 aa
AA seq
DB search
MEKGTLVEFRVQGDRRLGVVDRPDGKTRWFVVDERGQSHSLAPRQITYTVNGNTYKPSEI
DRFLEEVKPYLDPSSLEVAWELLVEDGETVTPSQMANLLFSESNSAPSYAAHCLLSDDKL
YFKQKGDAYEPRTAAQVADRKHQIEVEALKARGQQEFLTRVEQALQGEAVEWQRHDRQRL
EGLEKYGTLLADIVKVGLNYDSLARAYPPPAPVLETMNMLGRPATPQGAFQLLVDLGWWS
ATENLFLRRSSIPVQFPSKVLEVAQQRLDFPPTDLDTNRLDLTHLKVYTVDDESTTEIDD
GLSWEKLPDDRERLWVHIADPTRYLAPEDDLDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLVQGRVCCALSFGVVLDGTGAVQDFTIHPSLIKPTYRLTYEDVDEMLELGVQAEPEIA
AIATWATKRKSWRYNQGAISINMPEAMIKVKNDDISIDILDDSRSRQLVAEMMILAGEVA
ARYGQVHNIPLPFRGQPQPELPPEDELLRLPAGFVRACAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEVPPFTAEELKEVMMTVTSTTQELTMVERQT
NRYWALEYLRRHPEEIWQVTVLMWLREDSNLALILLEDLGLQLPMVFKRSVRLGEQVLVK
VSISDPQKDVIQFQEIIYQEAQTAAN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctagttgaatttagggttcaaggcgatcgccgtttgggcgtggta
gaccgcccagatggaaaaacccgttggtttgtggtagatgaacgtggtcaatcccacagc
ctcgcgcctagacaaattacatatacagttaacggcaacacttataagccatcggagatt
gacaggtttttggaggaagtcaagccttatctcgacccctccagcttagaagtggcttgg
gaattactagtagaagatggagaaacagtcacgccatcccaaatggccaatctactgttt
tcggaatcaaactcagctcccagttatgctgctcattgcttgttatcagatgacaagtta
tattttaaacaaaaaggtgatgcttacgaaccgagaacggcggctcaagtagcagatcgc
aaacaccagatagaagtagaagccctcaaagctaggggacagcaggaatttttgacgcgt
gtagaacaagcactccaaggcgaagcagtagagtggcagcgtcatgaccgccaacgccta
gaaggattggaaaagtatggaacacttttagccgacattgtgaaggtggggctaaactat
gattctctggcgcgtgcctatcctcccccagccccagtattagaaacaatgaatatgctg
gggcgacccgcaaccccccaaggcgcttttcaattactggtagatttggggtggtggagt
gccacggaaaacttgttcctgcgtcgttcgtcaattccagttcagtttcctagcaaggta
ttagaagtggcgcaacagcgtttggatttcccgccgacagacttagacacaaatcgcctt
gatttgactcacctgaaggtctatacagttgacgatgaaagcaccactgaaatagatgat
ggattgagttgggaaaaactcccggatgacagggaaagattgtgggtgcatatcgccgat
cctacccgctacttagcaccagaagatgatttagacctagaagccaggaagcgaggcagc
acagtttatttgccgacgggaatgattcccatgtttcccgaagtattggcaaccggcccc
atgagtttggtacagggaagagtttgctgtgctttgagttttggtgtggttttagatggg
acaggggcagtacaagactttactattcatcccagcttaattaagcctacctatcgcctc
acctacgaagacgtagatgagatgttggaattaggcgtacaagcagaaccagaaattgcg
gcgatcgctacttgggcaactaagcgcaaatcttggcggtataatcaaggcgcaatcagc
attaatatgccggaggcgatgattaaagtcaagaatgatgacatcagtatcgacattcta
gatgattcccggtcacggcagttagtagcagaaatgatgattctagctggtgaagtggca
gcccgttacggtcaagtacacaacatacccttgccctttcgtggtcaaccacaaccggaa
ttacccccagaagacgaattactccgacttccagccggatttgtccgtgcttgtgccatg
cggcgttgtatgcccaagagtgaaatgagtattactcctgtacgtcacgctggtttaggt
ttagatacttacacccaagccacatctcccatccgccgctacagtgacttactaacgcac
tttcaacttaaagcccacctccggggtgaagttcccccttttaccgccgaagaactcaaa
gaagtaatgatgaccgttaccagcaccacccaagagctgacaatggtagaacgtcagact
aataggtactgggcgttggaatatttgcgccgtcatccagaagagatttggcaggtaaca
gtgctaatgtggctgcgagaagatagtaacttagcactaattttgttagaagatttgggt
ttacaattaccgatggtattcaagcgatcggtgagactaggtgaacaggtattagtaaaa
gttagtatttccgacccgcaaaaagatgtaattcagtttcaagaaataatttatcaagaa
gcccagacagcagcgaattag
DBGET
integrated database retrieval system
