Nostoc sp. PCC 7120: alr1594
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Entry
alr1594 CDS
T00069
Symbol
rpoB
Name
(GenBank) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ana
Nostoc sp. PCC 7120
Pathway
ana03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ana00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
alr1594 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ana03021
]
alr1594 (rpoB)
03400 DNA repair and recombination proteins [BR:
ana03400
]
alr1594 (rpoB)
Enzymes [BR:
ana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
alr1594 (rpoB)
Transcription machinery [BR:
ana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
alr1594 (rpoB)
DNA repair and recombination proteins [BR:
ana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
alr1594 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BAB77960
UniProt:
P22703
Structure
PDB
PDBj
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All DBs
Position
1867058..1870453
Genome browser
AA seq
1131 aa
AA seq
DB search
MSSKKFNQVDKGRGMISENYIEPAFLLPDLIEIQRSSFRWFLEEGLIEELNSFSPITDYT
GKLELHFLGHNYKLKEPKYSVEEAKRRDSTYAVQMYVPTRLLNKETGDIKEQEVFIGDLP
LMTDRGTFIINGAERVIVNQIVRSPGVYYKSEIDKNGRRTYSASLIPNRGAWLKFETDRN
DLVWVRIDKTRKLSAQVLLKALGLSDNEIFDALRHPEYFQKTIEKEGQFSEEEALMELYR
KLRPGEPPTVLGGQQLLDSRFFDPKRYDLGRVGRYKLNKKLRLSVPDTVRVLTSGDILAA
VDYLINLEYDIGSIDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDAEVLT
PASLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVR
DIHPSHYGRICPIETPEGPNAGLIGSLATHARVNQYGFLETPFRPVENGRVRFDQPAAYM
TADEEDDLRVAPGDIPVDENGYIIGPQVPVRYRQEFSTTTPEQVDYVAVSPVQIVSVATS
MIPFLEHDDANRALMGSNMQRQAVPLLKPERPLVGTGLEAQGARDSGMVIVSRTDGDVVY
VDATEIRVRVSGQLPTASGKSTDNGQLTSQKGQEIRYTVSKYQRSNQDTCLNQKPLVRIG
ERVVAGQVLADGSSTEGGELALGQNIVVAYMPWEGYNYEDAILISERLVQDDIYTSIHIE
KYEIEARQTKLGPEEITREIPNVGEDALRQLDEQGIIRIGAWVEAGDILVGKVTPKGESD
QPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGRVVDVRLFTREQGDELPPGANMVVRVYV
AQKRKIQVGDKMAGRHGNKGIISRILPIEDMPYLPDGSPVDIVLNPLGVPSRMNVGQVFE
CLLGWAGHTLGVRFKITPFDEMYGEESSRRIVHGKLQEARDETGKDWVYNPDDPGKIMVY
DGRTGEAFDRPVTIGVAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRFGEM
EVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKGKAIPRPGTPESFKVLMRELQSL
GLDIAVHKVETQADGSSLDVEVDLMADQLARRTPPRPTYESLSRESLDDDE
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatctaaaaaatttaaccaggttgacaaaggtagaggcatgattagcgaaaattat
attgaacccgcctttctgttgcccgacttgattgaaatccagcgttcaagctttcgctgg
tttttagaagaagggctgatcgaagaacttaactcctttagtcctattacagactataca
ggcaaattagaactgcattttttaggacataattacaaacttaaggagccgaagtacagc
gttgaagaagcaaaacgccgtgacagtacttatgctgtacaaatgtatgttcctacccgc
ctgttgaataaagaaacaggggacatcaaagaacaagaagtatttatcggggatctacct
ttgatgaccgatcgcggcacgtttattattaacggagccgaacgggtaattgtcaatcaa
attgtgcgatcgcctggagtttattacaaatcagaaatcgataaaaacggtcgccgcaca
tattcagccagtctcatccccaaccggggagcatggctgaaatttgaaaccgaccggaat
gatttggtgtgggtacgcatagataaaacccgcaaactttcagcccaagtacttttaaaa
gctctaggcttatcagataacgaaatctttgatgctctgcgccacccagagtacttccag
aaaaccatcgaaaaagaagggcagttttccgaagaagaagctctgatggagttatatcgt
aaactgcgacccggtgaaccaccaaccgtactgggcgggcaacaattgttagactcccgc
ttctttgaccccaaacgttatgatttgggtcgagtcggtagatacaaacttaacaaaaaa
ttgcgcttatcagttcctgacacagtacgcgtcctcacctctggcgatattctggcagcc
gtcgattacctgatcaacctagagtatgacatcggtagtattgacgacatcgaccactta
ggtaaccgtcgggtaagaagcgtcggtgaattgttgcaaaaccaagtcagagtaggctta
aaccgcctagaaagaattattcgggaacggatgaccgtctctgacgcagaagtattaaca
ccagcatccttggttaacccgaaaccattggtagccgccatcaaagaattctttggctcc
agccaattgagtcagttcatggatcaaactaatcctttggcagaactgacccacaaacgc
cgtctgtcagcccttggccctggtggtttaaccagagaacgggcaggctttgctgtgcgc
gatattcacccctcccactacggacggatttgtcccattgagacaccagaagggccaaac
gctggtctaattggttccttggcgacccacgcccgtgttaaccagtatggcttcttagaa
actccattcagaccggtggaaaatggtcgggtgagatttgaccaacccgccgcttacatg
accgccgatgaagaagacgacctgcgggtagcaccaggcgatattcccgtagacgaaaat
ggctacattattggtccccaagtaccagtccgctatcgtcaggaattctccaccacaacg
ccggaacaagtagactatgtagccgtatcgccagtacagattgtctctgtagctaccagt
atgattcccttcttggaacatgatgacgctaaccgcgccctcatgggttccaatatgcaa
cggcaagctgtacctctactgaaaccagagcgtcctttggtgggaacaggcttagaagct
caaggtgcgagagactcagggatggtgattgtctcccgtactgatggagatgttgtctac
gtggatgccacggaaatacgtgtccgagttagtgggcaactacccacagctagtggcaaa
agtactgacaacggacaactgacaagtcagaagggacaagaaattcgctataccgtatcc
aagtatcagcgttccaaccaagatacctgcctcaaccaaaaacccctagtacggattggt
gagcgtgtagttgctggtcaggtgctagctgatggctcctccacggaaggcggggaattg
gcactcggacaaaatatcgtcgtcgcttatatgccttgggaaggctataactacgaagac
gcaattttaatttccgaacgactggtacaagatgatatttacacctcaattcacatcgaa
aaatatgaaattgaggcccgccagacaaaactaggcccagaagaaatcaccagagaaatt
cccaacgtcggggaagatgccctacgtcagttagatgaacagggaattattcggattggg
gcttgggtggaagctggagacatattggtaggaaaagttacaccaaaaggtgagtccgat
cagccaccagaagaaaagctactacgggcgattttcggggaaaaagcacgggatgtgaga
gataattccctccgtgtacccaacggagagaaaggacgtgtcgtggacgtgcgcttgttt
acccgtgaacaaggggacgaactaccaccaggagcaaacatggtagtccgggtgtatgta
gcccaaaagcggaaaatccaagtcggggacaaaatggcaggtcgccacggtaataaaggg
attatttcccgcatattgcccatagaagatatgccttacttacccgatggctcccctgtg
gatattgtcctcaatccccttggtgtacccagccggatgaacgtgggacaagtatttgag
tgtctattgggttgggctggtcataccttgggtgtcaggtttaagattactcccttcgat
gaaatgtatggggaagagtcatctcgccgcatcgtgcatggcaaattacaagaagcaagg
gatgaaacaggtaaagattgggtgtataacccagatgaccctgggaaaatcatggtgtac
gacggtcgtacaggggaagcttttgaccgaccagtaactatcggcgtagcttatatgctg
aaactcgtacacctagtagacgataagattcacgcccgttctacaggcccttactccttg
gtgactcagcaaccattgggtggaaaagcccaacaaggtggtcagcgcttcggggaaatg
gaagtctgggcattggaagccttcggtgcagcttataccttgcaggaactgctaactgtg
aaatcagacgatatgcagggacggaacgaagcattaaatgcgatcgttaaaggcaaggct
attcctcgaccgggaacaccagaatccttcaaggtattgatgcgagagctgcaatccttg
gggttagacattgctgtacataaagtagaaacccaagctgatggtagttccctggatgtc
gaagtcgatttaatggcagaccaattagctcgccgtacaccaccccgaccaacctacgaa
tcgctatcccgcgaatccttggacgatgatgaatag
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integrated database retrieval system
