Nostoc sp. PCC 7120: alr3716
Help
Entry
alr3716 CDS
T00069
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ana
Nostoc sp. PCC 7120
Pathway
ana03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
alr3716 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ana03400
]
alr3716 (uvrA)
DNA repair and recombination proteins [BR:
ana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
alr3716 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
alr3716 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_23
nSTAND1
AAA_21
DnaJ_CXXCXGXG
AAA_33
AAA_22
nSTAND3
AAA_25
Viral_helicase1
AAA_18
NACHT
ATPase
MMR_HSR1
cobW
MeaB
BCA_ABC_TP_C
Septin
IIGP
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
BAB75415
LinkDB
All DBs
Position
4484913..4487798
Genome browser
AA seq
961 aa
AA seq
DB search
MSDKKLAASLNGHLPYANDNSQNTIRIRGARQHNLKNIDLELPRDRLIVFTGVSGSGKSS
LAFDTIFAEGQRRYVESLSAYARQFLGQLDKPDVEAIEGLSPAISIDQKSTSHNPRSTVG
TVTEIYDYLRLLFGRAGEPHCPICDRCIAPQTIDEMVDRIMELPDRTRFQILAPVVRGKK
GTHRKLLSSLASQGFVRIRVDGEVRELSDSIELDKNITHTIEVVIDRLVKKDGIQERLVD
SLSTCLKQAGGIAIILVSPSTDTPEEKDEELVFSENFACPEHGAVMEELSPRLFSFNSPY
GACPNCHGLGTLRRFSPELVVPDPEAPVYAAIAPWSEKENSYYLELLYSLGQTHNFELQI
NWHKLTPEQQQIILYGEKQEAKDNPKTPSFKGVLPILQRQYEGGSELIKQKLEQYLIDQP
CEVCHGKRLKPEALAVKLGQYNILDLTGVSIRDCRERTEQLKLSDRQMQIADLVLREVKA
RLQFLLDVGLDYLTLDRAAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNA
RLLKTLTKLRDLGNTLIVVEHDEETIRAADYLVDIGPGAGIHGGNIISQGDLQALLTAEE
SLTGAYLSGRKVINTPGERREGNGRSLSIKNAYRNNLRNIDVEIPLGKLVAVTGVSGSGK
STLINELLYPSLQHHLTKKVPLPKELEKIQGLSAVDKAIVIDQSPIGRTPRSNPATYTGV
FDVIRDVFSQTVEAKARGYKPGQFSFNVKGGRCEACSGQGVNVIEMNFLPDVYVQCEICK
GARYNRETLQVKYKDKSISDVLNMTVEESLDFFQNIPKAATRLQTLVDVGLGYVQLGQPA
TTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTGLSFYDVHKLLDVLQRLVDKGNSILV
IEHNLDVIRCADWVIDLGPEGGDKGGEVIAVGTPEEIAKNTRSYTGQYLQQVLEQYPAVV
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaaagctagccgcatccctgaatggacatcttccctacgccaatgacaat
agccagaataccattaggattcggggtgcgcgacagcataatctgaagaatattgacttg
gaattgccacgcgatcgcctgatcgtgtttactggtgtatcaggttcgggtaagtcttcc
ttggcgtttgataccatcttcgcggaaggtcaacggcgctatgtggaatccctcagtgct
tacgccagacaatttttaggacaattagataaaccggatgtggaagccatcgaaggctta
agcccggcgatttccattgaccaaaaatctacatctcacaacccccgttctactgtgggg
acggtgacagaaatttacgactatttgcgactgttgtttggtcgagctggtgaaccccat
tgtcccatctgcgatcgctgtattgcaccccaaaccattgatgagatggttgatagaatt
atggaactaccagaccgcacgcgcttccaaattctcgcgcctgttgtcaggggtaagaaa
ggaactcaccgcaaattattatctagtttggcttcccaaggctttgtccggatacgcgtt
gatggggaagtccgtgaactgtctgattcgattgagttagataaaaatattactcatacc
attgaagttgtcattgaccgactggtaaaaaaagacggtattcaagaacgtttggtagat
tctctgtctacgtgtctcaaacaagctggtggtattgctattattcttgtcagtccttct
accgacacaccagaagagaaagacgaagaattagtattttcagaaaactttgcctgtcct
gaacatggcgcagttatggaggagttatcaccgcgcttgttctcattcaactctccctac
ggtgcttgtcccaactgtcacggtttgggaaccctcagaagattttccccagaattagtc
gtacctgaccctgaagctccagtatatgcggcgatcgctccttggtcagaaaaagaaaat
tcctattacctggaattactatatagtctaggacaaactcataattttgagttgcaaata
aattggcataagctgaccccagaacaacagcaaattattttgtatggggagaaacaggaa
gctaaagataatcctaagacaccaagttttaaaggtgtattgccaattttacaacgccaa
tatgaaggcggttccgaattaattaagcagaaattagagcagtatttaattgaccaacca
tgtgaagtttgtcacggcaaacggttaaaaccagaagctttggcggtgaagttgggacaa
tataatatcttagatttaactggtgtttcaattcgggattgccgagagagaacagagcaa
ttaaaattaagcgatcggcagatgcaaattgccgatttagtgttgcgagaagtgaaagct
agattgcaattcttgttagatgtcggcttagactatcttaccctagaccgtgcagccatg
accctctctggtggtgaagcccaacgcattcgccttgccacacaaattggttctggctta
acaggtgttctctacgttttagatgaaccaagtattggtttacaccaaagagataacgca
agattactcaaaactttaactaaattaagggatttaggtaataccctaattgtagttgaa
cacgatgaagaaacaatccgtgctgccgactacctagttgatattgggccaggtgcgggt
atccacggcggtaatattatttctcaaggcgatttgcaagctttattaacagcagaagag
tctcttactggtgcatatttatcgggacgtaaagtcattaatacaccaggagaacgccgc
gaaggtaacggtcggagtttaagcattaaaaatgcctatcgcaataatttaagaaatatt
gacgtagaaattcccttgggtaaattagttgctgtcaccggagtatctggttctggtaaa
tcgactttaattaacgaattactttacccatcactacaacatcatctaactaaaaaagtt
cctttacctaaagaattagagaaaattcaggggttgagtgcagtcgataaagccatcgtc
atcgaccaatcacccatcggacgcacaccacgttctaaccccgcaacttacacaggagtt
tttgacgtaattcgagacgtattttcacaaacagtagaagccaaagccagaggttacaaa
cccggacaattttctttcaacgttaaaggtggacgttgtgaagcctgtagtggacagggt
gtaaatgtcatagagatgaactttctccctgatgtttatgtacagtgtgaaatttgcaaa
ggagcaagatacaatcgcgaaacgttgcaagtgaaatataaagataaatctatttctgac
gttctcaacatgactgttgaggagagtttagattttttccaaaacatccccaaggctgct
acaaggttgcaaactttagtggatgttggcttaggctatgttcaactaggacagcccgca
actaccttatctggtggcgaagcgcaaagggtaaaattagccacagaattatctcgccgt
gctacaggtaagacactttatttaatcgacgaacctactacggggttatctttttacgat
gtccacaaattattagatgtgttgcaaagattggtagataaaggtaactcaattttagtt
attgaacacaacttagatgtgattcgttgtgctgattgggtgattgatttggggccagaa
ggtggtgataaggggggagaagtgattgctgttgggacaccggaggaaattgctaaaaat
actaggtcttataccgggcaatatttacagcaggtgttagaacagtatcctgcggtggta
aattaa
DBGET
integrated database retrieval system
