Nostoc sp. PCC 7120: alr3988
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Entry
alr3988 CDS
T00069
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ana
Nostoc sp. PCC 7120
Brite
KEGG Orthology (KO) [BR:
ana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ana03400
]
alr3988
DNA repair and recombination proteins [BR:
ana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
alr3988
Archaeal homologous recombinant proteins
alr3988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAB75687
CyanoBase:
alr3988
UniProt:
Q8YQ48
LinkDB
All DBs
Position
4803909..4806935
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPVQLVLKNFLSYRDATLDFRGLHTACICGSNGAGKSSLLEAITWALWGESRAAAEDDV
INSGEKEVRVDFTFQNNQQKYRIIRSRIRGASGVLEFQIETPSGFRAITGKGVRATQDLI
LEHIKLDYDTFINSAYLRQGRADEFMLKRPSERKEILAELLKLNQYDELEERAKDSSRQF
KVRAEELERSLESIKTQLQQRENTKAQRAELEAEVNQLQQVQAFETIQLQSLQVIQHQRQ
NSEQQLNFIRQQYQNLTQDSERLQQEQSAITTQLAELEAILHREEEIHNGYSHYQSLQSQ
EEAFAVKFDEHTRATALRQQKQQQLTKQIHELERQLQQVQGQLEALKQQEQEIQHTLSKS
GEIEAALAQLAAARRHLAHLDELQMQVSPLLQQRQRLQSHLDRVHAGLVARLEQLQATEN
QLQRASQRQPQLQQAVMEVAMQIDQMEKDRVYLQRVQEKGHERRNFIERLQAQQREYERL
LGEMEQKLQMLRNPDAICPLCERPLDEHHWNRVVDKTKDEYKETEGQLWVFREQMAVSDR
EIQVLRQEYREISQKLNAYDTLREQRGQLAAQLQSTSDAEQQLQQLAAEKQHLERSLQAG
DFALDQQAELRQLEQHLQQLNYNEQDHALARSEVERWRWAEIKQGQIKDATKRLATLAAR
KPELEAQITQIQTRIQQDQTDSEDAQQIAALEQQITDIGYSSEQHNNLRLAVRQSQAWQL
RYQQLLSAQQQYPQLQGRLQDLEASKLARLQERQQLATQIDSLVEQLAQAANPMQQIQAL
EQQLATRRRQLDESITQLGRLEQLAHQLETLQTQYEEQQQQYQTCKQQYRVYQELAQAFG
KNGIQALMIENVLPQLEAETNQLLSRLSANQLHVQFITQRAGKGSKSTKKNAKLIDTLDI
LIADARGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIVDEGFGTQDAEGCD
RLIAAINAIANDFACILTVTHMPHLKEAFQARIEVDKTQQGSRIRLLT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccagtacaacttgtcctgaaaaattttctgagttaccgtgatgcaactttagat
tttcgtggtttgcatacggcttgtatttgtggttccaatggagcgggtaaatcatctctc
ctcgaagccatcacatgggcgctatggggtgaaagtcgggcggcggctgaagatgatgtg
atcaattctggtgaaaaagaagttagggttgatttcacttttcaaaataatcagcaaaaa
tatcggataattcgtagtagaatccggggtgcatctggggttttggaatttcaaatcgaa
acaccctctggcttccgggctattactggtaaaggtgtccgagccacccaggatttgatt
ttagaacacataaagcttgattacgatacttttattaactctgcttatctacgtcaagga
cgagcagatgagtttatgctcaaacgtcccagcgaacgtaaggaaattttggcggagttg
ttgaagctcaatcaatatgatgaattggaagaacgagccaaagattcatcgcgtcaattt
aaagtgagggcggaagaattagagcgttctttggaatcgattaaaactcagttacaacaa
cgggaaaacaccaaagcccaaagggcagagttagaagcagaagttaaccaactgcaacag
gtacaagcttttgagacgattcagttgcagagtttgcaggtgattcaacaccagaggcaa
aatagcgaacagcagttaaattttatcaggcaacaataccaaaatttgacacaagatagc
gagcgcctccaacaagaacagtccgccatcacaactcagttagctgagttagaagctatc
ttgcatcgggaagaggagattcacaacggttatagccactaccaaagtctgcaatcccaa
gaagaagcatttgctgtcaaatttgacgaacacacccgcgccacagccttacgtcaacaa
aagcaacaacagttaactaaacaaattcacgaactggaaagacaactccaacaagtccaa
ggacaattggaagctttaaagcagcaagaacaagaaattcagcacaccttgagtaaatcg
ggggaaatagaagcagctttagcccaactcgccgccgcccgtcgccatctagcgcacctg
gatgaactgcaaatgcaggtttcccccttgctgcaacagcgccaacgtctacaaagtcat
ttagacagggttcatgcggggttagtcgccaggctcgaacaattacaagccacagaaaat
caactacaacgagcctcccaacgccaaccccaactgcaacaagcagtgatggaagtggcg
atgcaaattgatcaaatggagaaagacagggtttatttgcaacgggtacaagaaaaaggc
catgaaagacggaattttattgaacgactgcaagcccaacaacgggaatatgagagatta
ttgggagaaatggagcagaaattgcaaatgctccgcaaccccgacgctatctgtcctttg
tgcgaacgtcctttagatgagcatcattggaatcgggtagtagataaaaccaaagatgag
tataaggagactgaggggcaattgtgggtgtttcgtgagcaaatggcggtatctgatcgg
gaaattcaggtattaaggcaggaatatcgggaaatatcccagaaattaaatgcttacgat
actttacgggaacagcgaggacaattagccgcccaactgcaatctacaagcgatgctgaa
caacaattacaacaattggcagccgaaaaacaacacttagagcgatcgcttcaagctggt
gatttcgccctagatcaacaagccgaattgcggcaattggaacaacatctgcaacaatta
aattacaatgagcaagaccatgccctggctcgtagcgaagtggaaaggtggcgatgggca
gaaattaagcaaggacagatcaaagatgctaccaagcgcctagcgacactcgcagcccgc
aaaccagaattagaagcccaaattacgcaaatacaaaccagaatccagcaagatcagact
gattcggaagatgctcaacaaatcgcagcccttgagcagcaaattaccgacattggttat
agttctgagcagcataacaacctgcgtctagcagtgcgtcagtcccaagcttggcagttg
cgttaccagcagcttttatcagcccagcaacagtatccccaactccagggcagattgcaa
gatttggaagcctctaaacttgccagattgcaggaaagacaacaactcgccacccaaatc
gatagtcttgtggagcagttagcccaagctgctaacccaatgcagcaaatccaggcttta
gaacaacagttagccacgagacggcgacaactagacgaaagcatcacccagttaggacgt
ttagaacagttagcccatcaattagaaacactgcaaactcaatatgaggagcagcagcaa
caataccaaacttgcaaacagcaatatcgggtatatcaggaattagcccaagcgtttggt
aaaaatggcatccaagctttgatgattgagaacgtgttaccccaactggaagctgagaca
aatcaactgttatcaaggctgagtgcaaatcaactgcacgtacaatttattacccaaaga
gcaggtaagggcagtaaatctaccaagaaaaatgccaagctcatagataccttagatatt
ctcattgccgatgccagaggtacaagagcttatgaaacctactccggtggggaagccttt
agaattaactttgcgattcgtttagccttagcgaaactattagcccaaagagccggagcc
gcattgcaactattgattgtagacgaaggtttcggtacacaagatgctgaaggatgcgat
cgcctaattgccgccattaatgcgatcgccaacgatttcgcctgcatcctcactgttacc
catatgccccaccttaaggaagcctttcaagccagaattgaggtagataaaacgcaacag
gggtcaaggattcggttgttaacttaa
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