KEGG   Aotus nancymaae (Ma's night monkey): 105706392
Entry
105706392         CDS       T10127                                 
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
anan  Aotus nancymaae (Ma's night monkey)
Pathway
anan03013  Nucleocytoplasmic transport
anan03015  mRNA surveillance pathway
anan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:anan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105706392 (DDX39B)
  09122 Translation
   03013 Nucleocytoplasmic transport
    105706392 (DDX39B)
   03015 mRNA surveillance pathway
    105706392 (DDX39B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anan03019]
    105706392 (DDX39B)
   03041 Spliceosome [BR:anan03041]
    105706392 (DDX39B)
Enzymes [BR:anan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105706392 (DDX39B)
Messenger RNA biogenesis [BR:anan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105706392 (DDX39B)
Spliceosome [BR:anan03041]
 Complex C
  Other components
   EJC/TREX
    105706392 (DDX39B)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105706392 (DDX39B)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 105706392
NCBI-ProteinID: XP_012292180
Ensembl: ENSANAG00000030372
UniProt: A0A2K5DWU2
LinkDB
Position
Unknown
AA seq 428 aa
MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
SSYIEQTR
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcagagaacgatgtagacaatgagctcttggactatgaagatgatgaggtggagaca
gcagctgggggagatggggctgaggcccctgccaagaaggatgtcaagggctcctatgtc
tccatccacagctctggctttcgtgacttcctgctcaagccagagttgctccgggccatt
gtcgactgtggctttgagcatccatcagaagtccagcatgagtgcatccctcaggccatt
ctgggaatggatgtcctgtgccaggccaagtcgggcatgggaaagacagcagtgtttgtg
ttggccacgctgcaacaactggagccagttactgggcaggtgtctgtgctggtgatgtgt
cacactcgggagttggcttttcagatcagcaaggaatatgagcgcttctctaaatatatg
cccaatgtcaaggttgctgtgttttttggtggtctgtctatcaagaaggatgaagaggtg
ctgaagaagaactgcccgcatatcgtcgtggggactccaggccgtatcctagccctggct
cgaaataagagcctcaacctcaaacacattaaacactttattttggatgaatgcgataaa
atgcttgaacagctcgacatgcgtcgggatgtccaggaaatttttcgcatgaccccccac
gagaagcaggtcatgatgttcagtgctaccttgagcaaagagatccgtccagtctgccgc
aagttcatgcaagatccaatggagatcttcgtggatgatgagacgaagttgacgctgcat
ggattgcagcagtactacgtgaaactgaaggacaacgagaagaaccggaagctctttgat
cttctggatgtccttgagttcaaccaggtggtgatctttgtgaagtctgtgcagcggtgc
attgccttggcccagctactggtggagcagaacttcccagccattgccatccaccgtggg
atgccccaggaggagaggctttctcggtatcagcaatttaaagattttcaacgacgaatt
cttgtggctaccaacctatttggccgaggcatggacatcgagcgagtgaacattgctttt
aattatgacatgcctgaggattctgacacctacctgcatcgggtggccagagcaggccgg
tttggcaccaagggcttggcgatcacatttgtgtctgatgagaatgatgccaagatcctc
aatgatgtgcaggatcgctttgaggtcaatattagtgagctgcctgatgagatagacatc
tcctcctacattgaacagacacggtag

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