Aotus nancymaae (Ma's night monkey): 105709392
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Entry
105709392 CDS
T10127
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
anan Aotus nancymaae (Ma's night monkey)
Pathway
anan03015
mRNA surveillance pathway
anan03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
anan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105709392 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105709392 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anan03019
]
105709392 (CPSF6)
Messenger RNA biogenesis [BR:
anan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105709392 (CPSF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
105709392
NCBI-ProteinID:
XP_021521614
Ensembl:
ENSANAG00000019240
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatagacatttacgcggatgtgggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgacgatgtcatatctccatct
gcaaataatggagatgccccagaagaccgggattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcggcaccaaatgttgtctatacgtatactggaaagaga
attgcattatatattggaaatctaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcttcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggagggagttcccgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacccccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacccttaggtcct
ccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcctcctcctcta
gctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcctggacagcct
tttgggcagcctccattgggtccgcttcctcctggccctccacctccagttccaggctat
ggtccccctcctggcccaccacctccacaacagggaccacctccacctccaggccccttt
ccacctcgtccacctggtccacttgggccaccccttacactagctcctcctcctcatctt
cctggaccacctccaggtgccccaccgccagctccacatgtgaacccagctttctttcct
ccgccaactaacagtggcatgcctacatcagatagccgaggtccaccaccaacagaccca
tatggtcgacctccaccatatgataggggtgactatggcccccctggaagggaaatggat
actgcaagaacgccattgagtgaagctgagtttgaagaaatcatgaatagaaacagggca
atctcaagtagtgctatttcaagagctgtgtctgatgccagtgctggtgattatggaagt
gctattgagacattggtaactgcaatttctttaattaagcaatccaaagtatctgctgat
gatcgttgcaaagttcttattagttctttgcaagattgccttcatggaattgagtccaag
tcttacggttctggatcaagaagacgtgaacgatcaagagagagggaccatagtagatca
cgagaaaagagtcggcgccataaatcccgtagtagagaccgtcatgatgattattataga
gagagaagtagagaacgagagaggcacagggatcgtgatcgagaccgtgaccgagagcgt
gaccgagagcgcgagtatcgtcatcgttag
DBGET
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