Aotus nancymaae (Ma's night monkey): 105716540
Help
Entry
105716540 CDS
T10127
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
anan Aotus nancymaae (Ma's night monkey)
Pathway
anan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105716540 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anan03019
]
105716540 (PNLDC1)
Enzymes [BR:
anan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
105716540 (PNLDC1)
Messenger RNA biogenesis [BR:
anan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105716540 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105716540
NCBI-ProteinID:
XP_012306669
Ensembl:
ENSANAG00000034713
UniProt:
A0A2K5ELR8
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDVGAKEFEESLPLLQELVQESDFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSMFSAIEGEANKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNRYGF
DYNKFLKNGIPYMNEEQEKKIRHDILSGNWRVRSSLDKDQIKVVIDEVTRWLDLAEEGDW
MTLPGIAGFQAFEVQLVLRQALHNIWTVLKDDGVVVKKVSKQHRWYLQSTSCDRESCWKE
NIILSAKGFSVFFHMLVKAQKPLVGHNMMMDLLYLHEKFFRPLPESYDQFKQNIHSLFPV
LIDTKNVTKDIWKEMNFPRVSSLSEVYEVLNSDLNPTKNSGPEIVHAISCEKYVETKCPH
EAAYDAFLCGSVLLKVAHLLLQKVHGIDPIPESTFLQYLNVLAPYVNQVNLIRAGVPKIN
FSGPDYPSIRPPILILSVKRWPGVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDAR
NILKEYRGHPTLPVSLYRYWRHSPDVNCLLQVCGIMTAWALLAFILGRSGP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggtgccaaggagttcgaggagagcctccctctgctgcaagagcttgtccag
gagtcggacttcgtggggctggacatagaattcacaggccttcgttctaacctgtctggg
ccccagcagatcagtctttttgatttgccgtcggagtggtatctaaagacccgccagagt
gttcagcaatttacaatctgtcagattggattgtctatgttctccgctattgaaggagaa
gcaaacaagtacgtagcccattcatgtaacttctttctcttccctacaacatttgggatt
ttggactcagaattctctttccaggcttccagtgttcagtttttgaatcggtatggcttc
gactataacaagtttctcaaaaacggaatcccatatatgaatgaagaacaggagaagaaa
attagacacgatatcctgagtgggaactggagagttcgcagctctctggataaagaccaa
atcaaggtggtgattgatgaagtgacgcgatggctagacctggccgaggaaggcgactgg
atgactcttcctgggattgctggcttccaggcctttgaggtccagctggtgctgcggcag
gccctccacaacatctggacggtgctgaaagatgacggggtggtagtgaagaaagtgagt
aaacaacatcgttggtatcttcagagcacctcttgtgaccgagagagctgttggaaggaa
aatattattctctctgcaaagggtttttctgtctttttccatatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggacctgctgtacctgcatgagaagttcttc
agacccctgccagagagctacgatcaatttaagcagaatatccacagcctgtttcctgtt
ctcattgataccaagaatgtaacaaaggacatctggaaggagatgaatttcccgagggtg
tcgagtctttccgaagtctatgaggtcctgaacagtgacttgaatccaaccaagaattct
ggaccagagattgttcatgcaatcagctgtgagaaatatgttgagacaaagtgcccccat
gaagctgcatatgatgccttcctttgtgggtcagttcttttgaaagtggcacacttactc
ctacagaaagtgcacggcattgaccccattcctgagtcgacctttcttcagtacctcaat
gtgctggctccttacgtgaaccaagtgaacctcatccgagcgggggtcccaaagattaat
ttttctggtccagattatcccagtatccgacctcccatcctcatcctcagcgtcaaaagg
tggcctggggtcagcgagcagcaagtctaccataagtttcagaatctctgcaagtttgat
gtcaggcgactcacacgaagccagttcctactcctgaccaataagtttaaggacgcacgg
aacatcctgaaggagtaccggggccacccaaccctgcccgtctccctgtatcgctactgg
aggcactccccagacgtcaactgcctgctccaagtctgtggcatcatgacggcctgggcc
cttctcgccttcatccttggaagatctggtccctga
DBGET
integrated database retrieval system
