Aotus nancymaae (Ma's night monkey): 105730784
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Entry
105730784 CDS
T10127
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
anan Aotus nancymaae (Ma's night monkey)
Pathway
anan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105730784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anan03019
]
105730784
03041 Spliceosome [BR:
anan03041
]
105730784
Messenger RNA biogenesis [BR:
anan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105730784
Spliceosome [BR:
anan03041
]
Complex B
Other components
Prp19-related factors
105730784
Complex C
105730784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_15
TPR_7
RPN7
TPR_1
DHR-2_Lobe_A
PPR
Motif
Other DBs
NCBI-GeneID:
105730784
NCBI-ProteinID:
XP_012327637
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MVVIARLSQPEQPDLAFEKEDLPYEEEIMRNQFSVKCWLRCIEFKQRSPKPRLNQLYEWA
LKLLPCSYKLWYRYLKARRAQVKHCCVTDPAYEDVNNCYERAFLFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPIAQHSRIWPLYLRFLRSHPLPETVVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERSVSKAGKSNYQLWHELCDLISQNPDKVQSLSV
DAIIHGGLTRFTDQLGKLWCSLADYYIRSGHFEKALDVYEEAIQMVMTVRDFTRVFDSYA
QFKESMIAAKMETTSELEREEEYDVNLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKQVALHQGRPREIINTYTEAVQIMDPFKATDKPHTLWVAFAKFYEDNGQLDNACVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEVLWLLALPARWAEYFDGSEPVQNHVYKSL
KVWSMLADLEESLGNFQSTKAVYDRILDLRIMTPXIVINYAMFLEEHKYFEESFKEYERS
ISLFKWPNVSDIWSTYLTQFIAHYGGRXLERARDLFEQALDGCPPKYARTLYLLYVQLEE
EWGLARHAMAVYERAAMTVARATRAVEPAQQYDMFNIYIKWAAEIYGVTHTRGIYQKAIE
VLSDEHAREMCLQFADMECTLGEIDRARAICSFCSQICDPRSTGAFWQTWKDFEVRHGNE
DTIKEMLRIRRSVQATYNTQVNFMASQMLKVSGSATSTMFDLAPGQSGMDDMKLLEQLAA
KAGRDQPLRAQSKILFGRSDASREELAELAQQVNPEEIQLGEDEHEDEMDLEPNEVRLEQ
QSVPAAVFGSLKED
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatagcgcgactctcacagcccgagcagcccgaccttgccttcgagaaagag
gacctcccctatgaggaagaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tgcattgagttcaaacagcgctccccgaagcccaggctcaatcagctgtacgagtgggca
ctcaagctcctgccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcattgctgtgtgaccgaccccgcctatgaagatgtcaacaactgttatgag
agggcctttctgttcatgcacaagatgccccgtctgtggctagattactgccagttcctg
atggaccaggggcgtgtcacacacacccgccgcaccttcgaccgtgccctccgggcgctg
cccatcgcacagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgcccgagacagttgtgcgtggctaccggcgcttcctcaagctgagtcccgagagtgca
gaggagtacatcgagtacctcaagtcaagtgaccggctggatgaagccgcacagcgcctg
gccacagtggtgaacgacgagcgttccgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccagacaaggtccagtccctcagcgtg
gacgccatcatccatgggggcctcacccgcttcactgaccaactgggcaagctctggtgt
tcactcgctgactactacatccgcagcggccactttgagaaggctctggacgtgtacgag
gaggccatccagatggtgatgaccgtgcgggacttcacacgagtgtttgacagctacgcc
cagttcaaggagagcatgatcgccgcaaagatggagaccacctcagagctggagcgcgag
gaggagtacgatgtgaacctggagctgcgcctagcccgcttcgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcctgctgcgccagaacccacaccacgtgcacgagtgg
cataagcaggtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagag
gctgtgcagattatggaccccttcaaggccacagacaagccccatactctgtgggtggca
tttgccaagttttatgaggacaacgggcagctggacaatgcctgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtatggtgtcagtgcggg
gagctggagctccggcatgagaactatgacgaggtcctgtggctgctggcgctgcctgcc
cgctgggccgagtacttcgatggctcagagcccgtgcagaaccacgtgtacaagtcactg
aaggtgtggtccatgctcgccgacctagaggagagcctcggcaacttccagtccaccaag
gccgtgtatgaccgcatcctggacctgcgcatcatgacaccctagatcgtcatcaactac
gccatgttcctggaggagcacaagtacttcgaggagagcttcaaggagtacgagcgcagc
atctcgctgttcaagtggcccaacgtgtcggacatctggagcacctacctgacccaattc
atcgcccactacggaggccgcnaactggagcgggcacgggacctgtttgaacaggctctg
gacggctgcccaccaaaatacgccaggaccttgtacctgctgtatgtgcagctggaggag
gagtggggcctggcccggcacgccatggcagtgtacgagcgcgccgccatgaccgtcgcg
cgcgccaccagggccgtggagcctgcgcagcagtacgacatgttcaacatctacatcaaa
tgggctgccgagatctacggggtcacccatacccgaggcatctaccagaaggccatcgag
gtgctgtcggacgagcatgcacgtgagatgtgcctgcagttcgcggacatggagtgcacg
ctgggggagatcgaccgcgcccgggccatctgcagcttctgctcccagatctgtgacccc
cggtcgaccggggcgttctggcagacatggaaggactttgaggtccggcacggcaacgag
gacaccatcaaggagatgctgcgcatccggcggagcgtgcaggccacatacaacacgcag
gtcaacttcatggcctcacagatgctcaaggtctcgggcagcgccacgagcactatgttc
gacctggcccctgggcagagcggcatggatgacatgaagctgttggaacagctggcagcc
aaggcggggcgagaccagcccctgcgtgcccagagcaagattctgtttgggaggagcgac
gcctccagggaggagctggcagagctggctcagcaggtcaaccccgaggagatccagctg
ggcgaggatgagcacgaggacgagatggacctggagcccaacgaggtccggctagagcag
cagagcgtgccagctgccgtgttcgggagcctgaaagaagactga
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