Aotus nancymaae (Ma's night monkey): 135271235
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Entry
135271235 CDS
T10127
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
anan Aotus nancymaae (Ma's night monkey)
Brite
KEGG Orthology (KO) [BR:
anan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anan03016
]
135271235
Enzymes [BR:
anan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
135271235
Transfer RNA biogenesis [BR:
anan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135271235
Prokaryotic type
tRNA splicing ligases
135271235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
135271235
NCBI-ProteinID:
XP_064224006
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIASPEGQD
YLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQHVVDG
KERTLLVHRKGSTRVFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGT
TCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTC
HDAGISKKAIKLRPIAVIKG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgaccataagggacaggtgtgtgtgatgatccacagtggaagcagaggcctg
ggccaccaagtagccacagatgctctggtagctatggagaaggccatgaagagagacaag
attatagtcaatgatcggcagttggcctgtgctcgaattgcttccccagagggtcaagac
tacctgaagggaatggcagcagctgggaactatgcctgggtcaaccgctcttccatgacc
ttcttaacccgtcaggcttttgccaaggtcttcaacacaactccggatgacctggacctc
cacgtgatctatgatgtttctcacaacattgccaaagtggagcagcatgtggtggatgga
aaggaacggacactgttagtacacaggaagggatccacccgcgtgttccctcctcaccat
ccactcattgctgttgattaccaactcactggacaaccagtgctcattggtggcaccatg
ggaacctgtagttatgttcttactggcactgaacagggcatgactgagacctttggaaca
acctgtcatggagcgggccgtgcattgtcccgagcaaaatctcgacgtaatttagatttc
caggatgtcttagacaaattggcagatatgggaattgcaatccgtgttgcttcacccaaa
ctggttatggaagaggctcctgagtcctataagaatgtcacagatgtggtgaatacctgc
catgatgctggaatcagcaagaaagccattaaactgagaccaattgctgtgatcaaagga
tag
DBGET
integrated database retrieval system
