Anabaena sp. 90: ANA_C11622
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Entry
ANA_C11622 CDS
T02341
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
anb
Anabaena sp. 90
Pathway
anb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ANA_C11622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anb03019
]
ANA_C11622
Enzymes [BR:
anb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ANA_C11622
Messenger RNA biogenesis [BR:
anb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ANA_C11622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
AAA_19
AAA_22
Sacchrp_dh_NADP
DUF8086
Motif
Other DBs
NCBI-ProteinID:
AFW94392
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All DBs
Position
chANA01:complement(1774202..1775542)
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AA seq
446 aa
AA seq
DB search
MSFSNLGLSPEIVRAVTERGYNQPTPIQKQAIPVVLAGGDIMAGAQTGTGKTASFTLPLL
HRLSANKNVPSHSTGFSPIRALILTPTRELAAQVQESVRDYGKYLNLNSMVMFGGVSIGP
QKQKLRTRVDILVSTPGRLLDHVQQGTLNLSRVEVLVLDEADRMLDMGFINDIRRILSLL
PKQRQNLLFFATFSDKVKTLAAGLVHNPTMIEVARRNVTAATISQKVYHVDRDRKRQLLS
HLIQENNWYQVLVFSRTKHGADRLVKQLGEDRIQAMAIHGNKSQGARTHALAKFKDGTLQ
VLVATDIAARGLDISELPHVINYDLPNVPEDYVHRIGRTGRAGAEGQAISLVCVDEHHLL
ADIEQLIQQRLPKEVVAGFGVNPEIKAEPIPNGRKAPAGGGNQRTRRSAPKSASSKSPRQ
PSSRTAAGDKKPGSTSPTPRRSGKRR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttctaatctcggcttgtccccggaaattgtccgtgctgtcactgagcgagga
tataatcaacccacaccaatccagaaacaggctatccctgtggtattggctggtggtgat
attatggctggagcgcaaactggtacaggcaaaactgccagcttcactttgccgctgtta
catcggttatctgcaaataagaacgttcccagtcattctactggattttccccaattcgg
gcgttaattctgacacctacccgtgaactcgctgcacaggtgcaagaaagtgtccgtgat
tatggtaaatacttaaatctgaattcaatggtgatgtttgggggagtcagtattggtccc
caaaaacagaaattgcgaacccgcgtagatatcttggtttcaactccaggacgattgtta
gatcatgttcaacaagggactctgaacttgtcccgtgtggaagtgttggtactggatgaa
gcagaccgaatgctggacatgggttttattaatgatattcgccgcattctttcgcttttg
cccaaacaacgccagaatttgctattttttgcgacattctcagataaggtgaaaactctc
gcggctgggttagtacataacccgacaatgattgaagttgcacgtcggaacgtaactgcg
gcaacgatatcacagaaagtttatcatgttgaccgcgatcgcaagcggcaattactttct
catctgattcaggaaaataactggtatcaagtattagtgtttagccgcacgaagcatggc
gctgaccggttggtgaagcagttgggtgaagaccgcattcaagcgatggctattcacggt
aataagagtcagggagcgcgaactcacgctttagctaagttcaaagatgggactttgcag
gtattggtagcaacggatattgctgcgcgtggacttgatatcagcgaactaccccacgtt
attaattacgatttacctaatgtcccagaggattatgtgcatcgtattggtcggactgga
cgcgcaggtgcggaaggtcaagcgatttcccttgtatgtgttgatgaacatcatttgtta
gcggatattgagcaactaattcagcagcgtttaccgaaagaggtggtggctggttttgga
gtcaacccggaaattaaggccgaaccaattcccaatggacgcaaagcccctgctggtggt
ggaaatcagcgaactcgtcgttctgcgcctaaatctgcttcttcaaaatcacctagacag
ccttcttcacgcacagcagcaggtgataaaaagcctggttctacttctcctacaccacgt
cgttctggtaaacgtaggtaa
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