Anabaena sp. 90: ANA_C20004
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Entry
ANA_C20004 CDS
T02341
Symbol
rpoC1
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
anb
Anabaena sp. 90
Pathway
anb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ANA_C20004 (rpoC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anb03021
]
ANA_C20004 (rpoC1)
03400 DNA repair and recombination proteins [BR:
anb03400
]
ANA_C20004 (rpoC1)
Enzymes [BR:
anb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ANA_C20004 (rpoC1)
Transcription machinery [BR:
anb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ANA_C20004 (rpoC1)
DNA repair and recombination proteins [BR:
anb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ANA_C20004 (rpoC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AFW96468
UniProt:
K7WLI7
LinkDB
All DBs
Position
chANA02:6228..8120
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AA seq
630 aa
AA seq
DB search
MRSPQTNQFDYVKIGIASPERIRQWGERTLPNGQLVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKG
IPSYIAILLDMPLRDVEQIVYFNSYCVLAPGNADTLSYKQLLSEDQWLEIEDAIYSEDSQ
LEGVEVGIGAEALLRLLADINLEQEAETLRDEIEKAKGQKRAKLIKRLRVIDNFIATGSQ
PEWMVMEIIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDASVWDVLQ
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGKPIVTPSQDMVLGAYYLTAENPKATKGAGKYFSSLDD
VIMAYEAKQVELHAYIYVRFDGEIDSGEPDTEPVEVIEDKDAKGRLMSRTLIYKFRRVRE
DGEGNLISQYIYTTPGRAIYNQAIQEAIDA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagatccccccaaactaatcaatttgactacgtaaaaattggcatagcttcaccagaa
cgcatccgtcaatggggtgaacggactttacccaatggacaacttgtaggtgaagttacc
aagccagaaactattaattaccgcaccctcaaaccagaaatggatggtttgttttgcgag
cgcatctttggcccagctaaggattgggaatgccattgtggtaagtacaaacgggtgcgc
catagagggattgtctgcgagcgctgtggtgtagaagttacagagtcccgcgtccgtcgc
cacaggatgggttttattaagttggctgcccctgtggctcatgtttggtatctcaaaggg
attcctagctatattgctattctcctagatatgccgttgcgggatgtggagcagattgtt
tatttcaactcctactgcgttttagcaccgggcaacgctgatactctcagttacaaacaa
ctgttgagcgaagaccaatggttagaaatcgaagatgctatctacagcgaagattcccag
ttagagggtgtggaagttggcattggcgctgaagctctgctgcggctgttggcagatatt
aatttggagcaagaagcggaaaccctgcgggatgaaatcgaaaaggccaagggtcagaaa
cgggcaaaattaattaaacggctacgggtaattgataatttcatcgctaccggttctcag
ccagaatggatggtgatggaaattattcccgtcattcccccagatttgcgccccatggtg
cagctagatggaggcagatttgccaccagcgatttaaatgatttgtaccgccgggtgatt
aatcgcaacaaccgtttggctagacttcaggaaattctcgcgccggagattattgtccgc
aacgagaaacggatgctgcaagaggctgtggatgccttgattgacaatggtcggcgggga
cggactgtggtgggggctaataaccgtccgctgaaatccttgtccgatattattgaggga
aaacaaggacgtttccgccaaaacctgctgggtaaacgggtggactattcgggacggtcg
gtaattgtggtcggtccgaatctgaagattcaccagtgcggtctacccagagaaatggcc
attgagttgtttcagccctttgtgatcaatcgtctgattcgttccggcatggtcaacaat
atcaaggcagcgaaaaagctgatttctcgcaatgatgccagtgtttgggatgtgttgcag
gaagtgattgaggggcatccagtgatgctaaaccgagcgccaacgttgcaccgattgggg
attcaggcctttgaaccgattttggtagaaggaagagccattcaactccatcctttagtc
tgtcccgcctttaatgctgactttgacggtgaccaaatggcggttcatgttcccttgtcc
ttggagagtcaagctgaagcccggctgttgatgctggcttctaataatattttgtcacca
gcaacgggcaaaccgattgtgactcctagccaagatatggtgttgggagcatattatttg
acagcggaaaaccccaaggcaaccaagggggcgggtaagtatttctcctctttggatgat
gtaattatggcctatgaggcgaaacaggtagagcttcatgcctatatttatgtgcgtttt
gatggggaaattgattcgggtgaaccggatactgaacctgtggaggtaattgaggacaaa
gacgctaagggcaggctgatgagtcggactctgatttataagttccgacgggtgcgggaa
gatggggaggggaatttgatttctcagtatatttatacgactccaggacgagcaatttat
aaccaggcaattcaggaagcgatagatgcttag
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