Ancylobacter sp. TS-1: GBB76_02950
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Entry
GBB76_02950 CDS
T06239
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
anc
Ancylobacter sp. TS-1
Pathway
anc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GBB76_02950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anc03021
]
GBB76_02950
03400 DNA repair and recombination proteins [BR:
anc03400
]
GBB76_02950
Enzymes [BR:
anc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GBB76_02950
Transcription machinery [BR:
anc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GBB76_02950
DNA repair and recombination proteins [BR:
anc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GBB76_02950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
QFR32156
LinkDB
All DBs
Position
614551..615567
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQELIKPEKLEVAVGGDPKRLATVIAEPLERGFGQTLGNALRRILLSSLQGAAVT
SVHIDGVLHEFSSIPGVREDVTDIILNIKDIAIKMAGDGPKRMVVKKQGPGVVTAGDIQT
VGDVQVLNPELVLCTLDDGAEIRMEFTVDTGKGYIAADRNRPEDAPIGLIPVDSLYSPVK
KVSYKVENTREGQILDYDKLTLTIETNGSVTPEDALAYAARILQDQLEIFVNFEEPKRET
ESPAIQELPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLASMGLHLGMEVPGWPPENIEDLAKRFEDHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgattcagaagaactggcaagagctgatcaagcccgagaagcttgaggtcgcggtcggc
ggcgacccgaagcgccttgcgaccgtgatcgccgagccgcttgagcgtggcttcggccag
acgctcggcaacgcgctgcgccgcatcctgctgtcctcgctccagggcgcggcggtgacg
tcggtgcatatcgatggcgtgctgcacgagttctcctcgatcccgggcgtgcgcgaggat
gtcaccgacatcatcctcaacatcaaggacatcgctatcaagatggccggcgatggcccg
aagcggatggtggtgaagaagcagggtccgggcgtcgtcactgccggcgacatccagacg
gtcggcgacgtgcaggtgctgaaccccgagctggtgctctgcacgctcgacgacggcgcc
gagatccgcatggagttcaccgtcgacaccggcaagggctacatcgcggccgaccgcaac
cgtcccgaggacgcgccgatcggcctgatcccggtcgacagcctctactcgccggtcaag
aaggtctcctacaaggtcgagaacacccgtgagggccagatcctcgactatgacaagctg
accctgacgatcgagaccaacggttcggtcacgcccgaggacgcgctcgcctatgccgcg
cgcatcctgcaggaccagcttgagatcttcgtgaacttcgaggagcccaagcgcgagacc
gagagcccggccatccaggagctgcccttcaacccggcgctgctgaagaaggtggacgag
ctggaactgtcggtgcgttcggccaactgcctgaagaacgacaacatcgtctacatcggc
gacctgatccagaagaccgaggcggagatgctccgtaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccg
ggctggccgcccgagaacatcgaggatctcgccaagcggttcgaagatcactactga
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