Ancylobacter sp. TS-1: GBB76_03150
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Entry
GBB76_03150 CDS
T06239
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
anc
Ancylobacter sp. TS-1
Brite
KEGG Orthology (KO) [BR:
anc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anc03032
]
GBB76_03150 (topA)
03400 DNA repair and recombination proteins [BR:
anc03400
]
GBB76_03150 (topA)
Enzymes [BR:
anc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GBB76_03150 (topA)
DNA replication proteins [BR:
anc03032
]
Prokaryotic type
DNA Topoisomerases
GBB76_03150 (topA)
DNA repair and recombination proteins [BR:
anc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GBB76_03150 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
CARME
Motif
Other DBs
NCBI-ProteinID:
QFR32192
UniProt:
A0A5P8MVN5
LinkDB
All DBs
Position
complement(653280..655946)
Genome browser
AA seq
888 aa
AA seq
DB search
MQVVIVESPAKAKTINKYLGPGYEVIASYGHVRDLPAKDGSVDPEQDFRMLWDVDPKAQK
RLADIARAVKGADGLILATDPDREGEAISWHVLEILKEKRALKDQPVSRVVFNAITKQSV
LDAMKHPRIIDAALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EREIETFVRREYWSIAAQLATPRQDVFEARLVGADGRKITRLDVGTEAEATDFRTALEKA
DYTVRSVEAKPARRHPYPPFTTSTLQQEASRKLGLAPAITMRIAQRLYEGVDVGGETVGL
ITYMRTDGVDMAPEAVTQARSVIGSDYGDRYVPAAPRKYTAKAKNAQEAHEAIRPTDLSR
RPKDVTRHLEPEQAKLYELIWLRTVASQMESAELERTTVDIDAAVQGRALELRATGTVVK
FDGFLTLYREGSDDGDEDEESRRLPAMTSGEGLANKGIKADQHFTEPPPRYSEASLVKRM
EELGIGRPSTYASVLAVLRDREYVRLDKRRLVPEDKGRLVTAFLESFFDRYVEYDFTADL
EEKLDRISNGELQWKDVLRDFWRDFTAAVGETKELRVSDVISALDGMLTAHIFPPREDGS
DPRICPTCGTGRLSLKVGKFGAFIGCSNYPECKYTRPLAAQSGDSDNPAEANGTRVLGTD
PQSGLEVTVRDGRFGTYLQLGEGKDGEKPKRSSLPKGLAPADVDLDTALALLSLPREIGR
HPDGGEPILAGIGRFGPYVQHGKIYANIEPGDDILAIGLNRAVALIADKQNKGPGRRGGA
TAGRELGEFPEVGGMMTVRAGRFGPYVSHGKINATLPKGTDPETLTLEQAAELIRAKAGG
TPPAPGARKTAAKPAAAKKAPAARKPAAKKATASKATATKTKAAAKKG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgtcatcgtcgaatcgcctgccaaggcgaagacgatcaacaaatatctcggg
ccgggctacgaggtcatcgcctcgtacggacacgtgcgcgatcttcccgccaaggacggc
tcggtcgatcccgagcaggacttccgcatgctgtgggatgtcgatcccaaggcgcagaag
cgtctggccgacatcgcccgcgccgtgaagggcgccgacggactgatcctcgccaccgat
ccggatcgcgagggcgaggccatctcctggcacgtgctggagatattgaaggaaaagcgc
gcgctcaaggatcagccggtctcgcgcgtcgtgttcaacgccatcaccaagcagtcggtg
ctggatgcgatgaagcatcctcgcatcatcgacgccgcgctggtggacgcctatctcgcc
cgccgcgcgctggactacctcgtcggcttcacgctttctcccgtcctgtggcgcaagctg
ccgggcgcacgctctgccggccgggtgcagtcggtggcgctgcgcctcgtctgcgaccgc
gagcgcgagatcgaaaccttcgtgcggcgcgaatactggtcgatcgccgcccagctggcg
acgccgcgccaggacgttttcgaggcccgcctcgtcggcgccgacggccgcaagatcacc
cggctcgacgtcggcaccgaggccgaggccacggatttccgcacggcgctggaaaaggcc
gactacacggtacgttcggtcgaggcgaagccggcccgccggcatccctacccgcccttc
accacctcgacgctgcagcaggaagccagccgcaagctcggcttggcccccgccatcacc
atgcggatcgcgcagcggctctatgagggcgtcgacgtcggcggcgagaccgtcggcctc
atcacctatatgcgtaccgacggcgtcgacatggcgccggaagcggtgactcaggcgcgc
tccgtcatcggcagcgactatggcgaccgctacgtcccggcggcgccgcgcaagtacacc
gccaaggcgaagaacgcgcaggaagcccatgaggcgatccgcccgaccgacctgtcgcgc
cgcccgaaggacgtgactcgccatctcgaacccgagcaggcgaaactctacgagctgatc
tggctgcgcaccgtcgccagccagatggaatcggccgagctggagcgcaccacggtcgac
atcgacgcggcggtgcagggccgcgcgctggagcttcgcgccaccggcacggtggtgaag
ttcgacggcttcctcacgctgtaccgcgagggcagcgacgacggcgacgaggacgaggag
agccgccgcctgcccgcgatgacctccggcgagggcctcgccaacaagggcatcaaggcc
gaccagcatttcaccgagccgccgccgcgctactcggaagcctcgctcgtcaagcgcatg
gaagagctcggcatcggccggccgtccacctatgcctccgtgctcgccgtgctgcgcgac
cgcgaatatgtgcgtctcgacaagcgtcgcctggtgccggaagacaagggccgccttgtc
accgcgttcctggagagcttcttcgaccgctatgtcgagtacgacttcacggccgacctc
gaggagaagctcgaccgcatctccaatggcgagttgcagtggaaggacgtgctgcgcgac
ttctggcgcgatttcactgccgccgtcggcgagaccaaggaactgcgcgtctccgacgtc
atctcggcgctcgacgggatgctgaccgcgcatatcttcccgccgcgcgaagacggctcg
gacccgcgcatctgcccgacctgcggcaccggccggctgtcgctgaaggtcggcaagttc
ggcgccttcatcggctgctcgaactatcccgagtgcaagtacacccgcccgctggcggcg
cagagcggcgattccgacaatccggccgaggccaacggcacccgcgtgctcggcaccgat
ccccagagcgggctcgaagtcacggtgcgcgacggccgcttcggcacctatcttcagctc
ggtgagggcaaggacggcgagaagcccaagcgctccagcctgcccaagggcctcgccccg
gcggatgtcgacctcgatacggcgctggccctgctctcgctgccgcgcgagatcggccgc
cacccggacggcggcgagcccatcctcgccggcatcggccgcttcgggccctatgtccag
catgggaagatctacgccaatatcgagccgggcgacgacatcctggccatcggcctcaac
cgggctgtggcgctgatcgccgacaagcagaacaaggggcccggccgtcgtggcggcgcc
accgccgggcgcgagcttggcgagttcccggaggtcggcggcatgatgaccgtgcgcgcc
ggccgcttcggcccctatgtgagccacggcaagatcaacgcgacgctgcccaagggcacg
gacccggaaacgctgacgctggagcaggcggcggagctgatccgcgccaaggccggcggc
acccctccggcgccgggcgcgcgcaagacggcggccaaacccgccgccgccaagaaggcc
ccggcggcccgcaagccggccgccaagaaggcgacggcgtcgaaggccaccgccaccaag
accaaggcggccgccaagaagggctga
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