KEGG   Ancylobacter sp. TS-1: GBB76_04510
Entry
GBB76_04510       CDS       T06239                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
anc  Ancylobacter sp. TS-1
Pathway
anc02024  Quorum sensing
anc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:anc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GBB76_04510 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GBB76_04510 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anc03019]
    GBB76_04510 (hfq)
   03036 Chromosome and associated proteins [BR:anc03036]
    GBB76_04510 (hfq)
Messenger RNA biogenesis [BR:anc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GBB76_04510 (hfq)
Chromosome and associated proteins [BR:anc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GBB76_04510 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 AcMNPV_AC11
Other DBs
NCBI-ProteinID: QFR32439
LinkDB
Position
complement(913576..913827)
AA seq 83 aa
MAAERSQNLQDTFLNHVRKNKTPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKH
AISTIMPGHPVQLFEPDETGEKG
NT seq 252 nt   +upstreamnt  +downstreamnt
atggccgcggaacgttcgcagaacctccaggacacctttctcaaccacgtccgcaagaac
aagacgccgctcaccatctttctggtcaacggtgtgaagctccagggagttgtcacctgg
ttcgataatttctgcgtgctgctgcgccgggacggccattcgcagctcgtctacaagcat
gccatttcgaccatcatgcccggccatccggttcagcttttcgaaccggacgagaccggc
gagaagggctga

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