Ancylobacter sp. TS-1: GBB76_04510
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Entry
GBB76_04510 CDS
T06239
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
anc
Ancylobacter sp. TS-1
Pathway
anc02024
Quorum sensing
anc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBB76_04510 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GBB76_04510 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anc03019
]
GBB76_04510 (hfq)
03036 Chromosome and associated proteins [BR:
anc03036
]
GBB76_04510 (hfq)
Messenger RNA biogenesis [BR:
anc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GBB76_04510 (hfq)
Chromosome and associated proteins [BR:
anc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GBB76_04510 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
QFR32439
LinkDB
All DBs
Position
complement(913576..913827)
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AA seq
83 aa
AA seq
DB search
MAAERSQNLQDTFLNHVRKNKTPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKH
AISTIMPGHPVQLFEPDETGEKG
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaacgttcgcagaacctccaggacacctttctcaaccacgtccgcaagaac
aagacgccgctcaccatctttctggtcaacggtgtgaagctccagggagttgtcacctgg
ttcgataatttctgcgtgctgctgcgccgggacggccattcgcagctcgtctacaagcat
gccatttcgaccatcatgcccggccatccggttcagcttttcgaaccggacgagaccggc
gagaagggctga
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