Ancylobacter sp. TS-1: GBB76_04800
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Entry
GBB76_04800 CDS
T06239
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
anc
Ancylobacter sp. TS-1
Pathway
anc03030
DNA replication
anc03430
Mismatch repair
anc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBB76_04800 (dnaE)
03430 Mismatch repair
GBB76_04800 (dnaE)
03440 Homologous recombination
GBB76_04800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anc03032
]
GBB76_04800 (dnaE)
03400 DNA repair and recombination proteins [BR:
anc03400
]
GBB76_04800 (dnaE)
Enzymes [BR:
anc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBB76_04800 (dnaE)
DNA replication proteins [BR:
anc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GBB76_04800 (dnaE)
DNA repair and recombination proteins [BR:
anc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GBB76_04800 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QFR32494
UniProt:
A0A5P8MWX6
LinkDB
All DBs
Position
complement(981214..984648)
Genome browser
AA seq
1144 aa
AA seq
DB search
MAETDVGFVHLHVHSSFSLLEGALSIGKLADLAKKDRQPAIALTDTGNLFGALEFSEKMA
GSGIQPILGCSLAVDFPGPAPRGPAGAERPRLVLLAANEEGWKNLMELVSRSFLDTAADG
TPHIKLDWLTGRADGLIALTGGPGGPIDRALAAGSPDLAEQRLAALSGLFGDRLYVEIQR
HGVAEERRVEPALVDLAYRLELPLVAANEPFFASQDDYEAHDALICIAEGRLVAEPDRRQ
LTPEHRFRTRAEMATIFADLPEALANTVEIARRCAWRPRTVKPILPRFTLDRDEAEELRL
QAEEGLRHRLSVHGPAPELTEKDYEDRLAFELSIIEKMKFPGYFLIVSDFIKWAKAQGIP
VGPGRGSGAGSLVAYSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERRDEVIRY
VQQRYGRDQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPANPVTLKQAI
GDEPRLQAESDANPVVKRAFDIATRLEGLNRHASTHAAGIVIGDRPLARLVPLYRDPRSD
MPVTQYNMKWVEQAGLVKFDFLGLKTLTVLQTAVRLVAQRGIALDLSTIPLDDPKTYAML
TRGETVGVFQVESAGMRRALVDMKPDRLEDIIALVALYRPGPMANIPVYCAVKNGQEKAA
YAHPALEGSLKETYGVIIYQEQVMQIAQTLSGYSLGEADLLRRAMGKKIRAEMDKQRERF
VTGAVERDVPKAKASEIFDLLAKFADYGFNKSHAAAYALVAYQTAYMKANYATEFLAASM
TLDMGNTDKLAEFRQEAQRLGIEVVPPSVNHSGREFAVKDGRILYALAAIKGVGVHAVDA
IVEARGDRPFASLSDFAARINAKALNKRTMESLVNAGAFDVLEKNRARASAAIDSILAHA
ASVGAEVASGQWNMFGGPAEAADLPLPNAAPWLPAEKLQREYDAIGFFLTGHPLDDYGKA
LERLRVQRWTDFTRSVRAGSIAGRLAATVVSRQERRTKTGNKMGIVGLSDPSGQFEAVLF
SEALAQFRELLEPGTALLLQVSAEMQGEDVRARIQTAEPLDQAASKMQKGMRIFVRSPDP
LESVASRLGSLSGGRGDGEVALVLLLGARGETEVEVKLPGRYSLSPQIAGAMKAVPGVEM
VEMA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacagacgtcggtttcgttcacctgcacgtgcattcctccttctcgctgctg
gagggcgcgctctccatcggcaagctggccgatctcgccaagaaggaccgccagcccgcc
atcgcgctcaccgacacgggcaacctgttcggcgcgctggaattctccgagaagatggcc
ggcagcggcatacagcccatactcggctgctcgctggcggtggactttcccggcccggcc
ccacgcggcccggccggtgccgagcgcccgcgcctcgtcctgctcgcggcgaacgaggag
ggctggaagaacctgatggagctcgtctcgcgctccttcctcgacactgcggcggacggc
acccctcacatcaagctcgactggctgaccggccgcgccgacgggctgatcgcgctgacc
gggggccccggcggccccatcgacagggcgctcgcggccggcagcccggatctggccgag
cagcgcctcgccgcgctctccgggctgttcggcgaccggctctatgtcgagatccagcgg
cacggcgtcgccgaggagcggcgcgtcgagccggcgctggtcgatctggcctaccgcctc
gaactgccgctggtggccgccaacgagccgttcttcgccagccaggacgactatgaggcg
catgacgcgctgatctgcatcgccgagggccggctggtcgccgagcccgaccgccgccag
ctcacccccgagcaccgcttccgcacccgcgccgagatggcgacgatcttcgccgacctg
ccggaggcgctggccaacacggtggagatcgcccgacgctgcgcctggcgcccgcgcacg
gtgaagccgatcctgccgcgcttcacgctcgaccgcgacgaggcggaggagctccgcctg
caggcggaggaggggctgcgtcatcgcctttccgtgcatggcccggcgccggagctgacg
gaaaaggactatgaggaccggctcgccttcgagctgtccatcatcgagaagatgaagttt
cccggctatttcctcatcgtttcggacttcatcaaatgggcgaaggcgcagggcattccg
gtggggccgggccgtggctcgggcgcgggttcgctggtggcctattcgctcaccatcacc
gatctcgacccgctgcgcttcgggctgctgttcgagcgcttcctcaaccccgagcgcgtg
tcgatgcccgacttcgacatcgacttctgccaggagcggcgcgacgaggtgatccgctac
gtccagcagcgctacgggcgcgatcaggtggcgcagatcatcaccttcggtacgttgcag
gcacgcggcgtgctgcgcgacgtcggccgtgtgctggaaatgccctacggccaggtcgac
aagctgtgcaagctggtgccgcagaacccggccaatccggtcacgctcaagcaggccatc
ggcgacgaaccgcgcctgcaggccgagagcgacgccaacccggtggtcaagcgcgccttc
gacatcgcgacacggcttgaggggctgaaccgccacgcctcgacccatgccgccggcatc
gtcatcggcgaccggccgctggcgaggctcgtgccgctgtaccgagacccgcgctcggac
atgccggtgacgcagtacaacatgaaatgggtcgagcaggccgggctggtgaagttcgac
ttcctcggcctcaagaccctgaccgtcctgcagacggcggtgcgcctcgtcgcccagcgc
ggcatcgcgctcgacctgtcgaccatccctctcgacgatcccaagacctacgccatgctg
acgcgcggcgagacggtcggcgtgttccaggtggaaagcgcgggcatgcggcgcgcgctg
gtcgacatgaagccggaccggctggaagacatcatcgcgctggtggcgctctaccgcccc
ggccccatggcaaacatcccggtctattgcgcggtcaagaacgggcaggagaaggccgcc
tacgcccaccccgcgctggaaggcagcctgaaggagacctacggcgtcatcatctaccag
gaacaggtgatgcagatcgcgcagacgctgtcgggctattcgctcggcgaagccgacctg
ctgcgccgcgccatgggcaagaagatccgcgccgagatggacaagcagcgtgagcgcttc
gtcaccggcgcggtggaacgcgacgtgccgaaggccaaggcgtcggagatcttcgacctg
ctggccaagttcgcggactacggcttcaacaagagccacgcggccgcctatgcgctggtc
gcctaccagaccgcctatatgaaggcgaattacgcgaccgagttcctcgccgcgtcgatg
acgctcgacatgggcaacaccgacaagctggcggaattccgccaggaggcgcagcgcctc
ggcatcgaggtggtgccgccctcggtcaaccattccggccgcgaattcgcggtgaaggac
gggcgcatcctctacgcgctcgccgccatcaagggcgtgggcgtgcatgcggtcgacgcc
atcgtcgaggcgcggggggaccgccccttcgccagcctctcggacttcgccgcccgcatc
aacgccaaggcgctgaacaagcggacgatggaaagcctcgtcaatgccggcgccttcgac
gtgctggagaagaaccgcgcccgggcgtcggcggcgatcgattctatcctcgcccatgcc
gcctcggtgggcgccgaggtggcgtcgggccagtggaacatgttcggcgggccggccgag
gcggcggatctgccgcttcccaacgccgcgccctggctgccggccgagaagctccagcgc
gaatacgacgccatcggcttcttcctgaccggccacccgctcgacgattacggcaaggcg
ctggagcggctgcgcgtgcagcgctggaccgacttcacccgctcggtgcgcgccggctcc
atcgcggggcgcctcgcggcgacggtggtcagccggcaggagcggcgcaccaagaccggc
aacaagatgggcatcgtcggattgtcggatccttccggccagttcgaggcggtgctgttc
tccgaggcgctggcgcagttccgcgagctgctggagccgggcaccgcgctgctgcttcag
gtttccgccgagatgcagggcgaggatgtgcgcgcgcgcatccagacggccgagccgctc
gaccaggccgcctccaagatgcagaagggcatgcgcatcttcgtgcgttcgcccgatccg
ctggagagcgtggcgtcgcggctcggctcgctgtccggcgggcgcggggacggcgaggtg
gcgctggtgctgctgctcggcgcgcgcggggagaccgaggtcgaggtgaagctgcccggc
cgctacagcctgtcgccgcagatcgccggggccatgaaggcggtgcccggcgtcgagatg
gtggagatggcctga
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