Ancylobacter sp. TS-1: GBB76_07325
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Entry
GBB76_07325 CDS
T06239
Name
(GenBank) autotransporter domain-containing protein
Organism
anc
Ancylobacter sp. TS-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
QFR32953
UniProt:
A0A5P8MW73
LinkDB
All DBs
Position
complement(1513741..1518657)
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AA seq
1638 aa
AA seq
DB search
MPFGVGGRHESRNFVNCLNGSTALVQIASLPAGRRSSPMPDSGRGRDLRIGKAGAFAGAL
ATVLAAAVAVPPAADAETLNGSGQAGFDTLIPQATQPGDNDTVDIAIGSTAGNVVIGSGL
ALPGAATGIQLNFLADPGTPAGDANVNVENGAHFVIGSGAAVDFVGNGRFNIGRGAGAEG
SVGMTGGTLSLGKENGYSALNIGYTGSGSFTQSGGAVDLDGSAFQVGVVGGTGTYNLNGG
SFFLTPASTVYLGEGVGGVGTLNVTGNAQFTTTDVVSGGGTQMFVGVDGGTGKIVQDGAG
SLVSIDTGSNAFWFGWGTGGQGTYDLRAGTFNVDGTTGVTFGRDAGTSGTFLQSGGTFSS
TGQVIIGAGGTGSYTLSGGTSTMNGGLRIASGAGTGQVVQSGGAATVIGGITYGSGIGSY
ELNGGTFTVDGITGGNVNSTFSFGGGTLIASQSFTTSSAFATSFDAASTIQVDGTDVLSW
NSVISGTGGLTKTGTGTLSLGGDNSTYGGDVAIAGGTLALTNKNGIGIGNDVTAGAGTVF
DLTALDAGNPGTGAGIVQIGALSGGGEVKLGDSFLVSSVGAGQSAAFSGTITSDGWAYDS
LYGRFYKAGAGDLLINGSTMERGEATIIEGSMTQSAGTTNWSNINVGGDGGTGLLTVSGG
TLTLNVGLRVGDFGGTGTVNQTGGTVQLEQSCDDDDSCASLNIGNQGGTGIYNISGGSLL
LGGGSHSIGRNAGSRPTSSGTLNISGTGLVQLSPDISDGYLVIGDRDPGSQPNSTGVINQ
TGGTLRIAGSRLYLGGYGSGTYNLNGGTLEIGGASLLGLYGGGGNTTGSYDFNLGGGAIK
VIGSSLTTSVDAELTGTSISTIDTNGFDATWNGTLSGTGSLRKSGEGLLDLTKPENSYIG
DTYFAGGKLRAVDGALGAGDMIFEGTSSFVFASTFGLTNDVTLQSGVIGGFDVGGGLTGT
LSGNISGAGGLAKTGLGTLVLDGTENTYSGATLVQEGTLVVASEGALSDFTQVSVTTGAF
FELQGVEQSVDGLEGDGNVVLGAGSSLTVAPTAGGSEFSGVISGPGGLNVSGSSSTPGAP
PSVLTLSGINDYSGPTSVDTAKLVVNGSIANSDVTVGEGGTLGGSGTVKSVTLTPNSTLA
PGNSPGVLTVVEDVNFVAGSAYEVEFDGSLSDKVILQEGDAFIADDAELSLLILSRASLL
TPYTIIEIADGSSGTVQVTGDGFEVTLNRPLLEALISYSSTSVDVTFEAIDAPWSSMMRT
TNQGATANAVQSLGYGNPLFEEVAFLSDVQVGPTVDLLSGEIGPSAKSVLINDSQFLRSA
VFDRLASADRPEAASGIVVAPLAYAAPAPTAAAFPVKAEPAVAEAPVSAIWSQAFGSWGS
TDGNGNAASVNRDTGGFFIGADTLFGDWRLGVLGGYSRTSFDVNARSSTGDSDNYHAALY
AGTNWGAVNLRAGAAYTWNDVSTSRFAPLPLPGTLNADYDAGTAQVFGELGYGMSFGAVD
FEPFVGLAYVNLGTDAFAETGGLAALYSPSSTMDATYSTLGLRAASTVNFGRTVATLKGL
LGWRHAFGDVDSLSTYMFEMGSTPFTVAGVPIAEDSLLVDVGMSVAVNAFVNVGIAYSGE
FGDGSTDQSVRGSLDWKF
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgccttttggcgtcggggggcggcacgaaagtcgcaatttcgtcaattgcttgaacggc
tcgaccgctctggtgcagatcgcgtccctgccggccgggcgcaggtcgagcccgatgccc
gattcggggcggggcagggatctgcgtatcggcaaggcgggtgcctttgccggtgcgctc
gcgacggtcctcgccgcggcggtcgctgtgccgcccgccgccgatgccgagactctgaac
ggctccggccaggccggtttcgataccctcatcccgcaggcgacacagcccggggacaac
gacaccgtcgatatcgccatcggttcgaccgccggcaatgtcgtcatcggctccggtctt
gcccttccaggcgcggcgaccggcatacagctcaatttccttgcggaccccggcacgccg
gcaggcgatgcgaacgtgaacgtcgagaacggcgcccatttcgtcatcggctcgggcgcg
gccgtcgacttcgtcggcaatggtcgtttcaacatcggccgcggcgccggtgccgagggc
tcggtcggcatgaccggcggcacgctgtcgctcggcaaggagaacggctactcggcgctc
aacatcggctatacgggcagtggcagcttcacccagtccggcggggcggtggatctcgac
ggcagcgcctttcaggtgggcgtggtcggcggaaccggcacctataacctcaatggcggc
agctttttcctgacgcccgcttcgacggtctatctcggcgagggcgtcggcggcgtcggc
acactcaatgtcaccggcaacgcgcagttcacgacgaccgatgtcgtgtcgggcggcggc
acacagatgttcgtcggcgtcgatgggggcacgggcaagatcgtgcaggacggggccggt
tcgctcgtgtcgatagacactggcagcaatgccttctggttcggctggggcaccggcggg
cagggcacttacgacctgcgggccggcacgttcaatgtcgatgggacgaccggggtcacc
ttcggccgcgatgcgggcacgtccggcaccttcctccagagcgggggcaccttctcctcc
acaggccaggtcatcatcggcgctggcggcacgggctcctacaccctgtcgggcggcacc
tcgacgatgaacggtggcctgcgtatcgccagcggcgccgggaccggccaggtggtgcag
tccggcggcgccgcgacggtgatcggcggcatcacctatggctccggcattggcagctat
gagcttaatggcggcaccttcaccgtcgacggcatcacgggcgggaacgtcaattcgacc
ttcagcttcggcggcggcactctgatcgcttcccagagcttcaccacctcatcggctttc
gccaccagcttcgacgccgcctcgaccatccaggtcgacggcaccgacgtgctgagctgg
aacagcgtcatctccggtacgggcgggctcaccaagaccggcaccggcacgctgagcctc
ggcggcgacaacagcacctatggtggtgacgtcgccatcgcgggcggcacgcttgcgctg
accaacaagaacggcatcggcatcggcaacgacgtcaccgcaggggccggcaccgtcttc
gacctgaccgccctcgacgccggcaatcccggtacgggcgcgggaatcgtccagatcggg
gcgctctccggtggcggcgaggtgaagctcggcgacagcttcctcgtgtcctccgtcggc
gcgggccagagcgcggccttttccggcacgatcacgtcggacggctgggcctacgattcg
ctctacgggcgcttctacaaggcgggtgcgggagatctgctgatcaacggctcgacgatg
gagcggggcgaggcgaccatcatcgaaggctcgatgacgcagagcgcgggcacgacgaac
tggtccaacatcaatgtcggcggcgacggcgggaccggcctgctcaccgtgtccggcggc
acgctcaccctgaatgtcggcctgcgagtcggcgatttcggcggcaccggcacggtcaac
cagaccggcggcacggtgcagctggagcagagctgcgacgacgacgacagctgcgcttcg
ctcaatatcggcaatcagggcggcaccggcatctacaacatcagcggcggctcgctgctg
ctggggggcggcagccactccatcggccgcaatgccggcagccggccgaccagcagcggc
accctgaacatcagcggcaccggcctcgtgcagctctcgcccgacatcagcgacggctat
ctcgtcatcggcgaccgcgatcccggcagccagcccaacagcacgggcgtcatcaaccag
accggcggcacgctgcgcatcgccggctcgcgcctgtatctcggcggctacggctcgggc
acctacaacctcaatggcggcacgctggagatcggcggggcgagcctgctcggcctctat
ggcggcggcggcaacaccaccggctcctacgacttcaacctgggcggcggcgccatcaag
gtgatcggcagcagcctgaccacctcggtcgacgccgagctgaccgggacgtcgatctcc
acgatcgacaccaacggcttcgacgccacctggaacggcacgctctccggcacggggtcg
ctgcgcaagagcggcgaggggctgctcgacctgacgaagccggagaacagctacatcggt
gacacctatttcgccggcggcaagctgcgcgcggtcgacggggcactcggcgccggcgac
atgatcttcgagggcaccagcagcttcgtcttcgccagcaccttcgggctgaccaacgat
gtgacgctgcagtccggcgtcatcggcggcttcgatgtcggcggcggcctgacgggcacg
ctgagcgggaatatctcgggtgccggcgggctcgccaagaccggcctgggcacgctggtg
ctcgacggcacggagaacacctattccggcgccaccctcgtgcaggagggcacgctcgtc
gtcgccagcgagggcgcgctgtccgacttcacgcaggtcagcgtcacgaccggcgccttc
ttcgagcttcagggcgtggagcagagcgtcgacggtctcgagggtgacggcaatgtcgtg
ctcggcgcgggttcgagcctgaccgtcgccccgacggcgggcggctccgagttcagcggc
gtgatttccggcccgggcgggctgaacgtctcgggctccagctcgacgccgggggctccg
cccagcgtgctcacgctgagcggcatcaacgactattccggcccgacctcggtcgacacg
gccaagctcgtcgtcaacggctcgatcgccaattcggacgtcacggtgggggagggcggc
acgctggggggctcgggcaccgtgaagtcggtgacgctaacccccaactcgacgcttgcg
ccgggtaactcgccgggggttcttaccgtcgttgaggatgtgaacttcgtcgccggctcg
gcctatgaggtggagttcgacggctccctgtccgacaaggttatccttcaggaaggcgac
gccttcatcgccgatgacgccgagctcagcctgctgatcctgtcccgcgccagcctgctc
acgccctacaccatcattgaaatcgcggatggctcctcgggcacggtgcaggtcacgggc
gacgggttcgaggtgacgttaaaccgcccgctgctcgaagcgctgatttcctattccagc
acgtcggtggacgtgactttcgaggccatcgacgccccgtggtcgtcaatgatgcgcacc
accaaccagggggcgaccgccaatgccgtccaatcgctgggctatggcaatccgctcttc
gaggaggtcgccttcctgagcgacgtgcaggtcggccccaccgtggacctgctgtcgggc
gagattggcccatcggccaagagcgtgctgatcaatgacagccagttcctgcgcagcgcg
gtgttcgaccggctggccagcgccgacaggccggaggcggcaagcggcatcgtggtcgct
ccgctggcttatgccgcgcccgcgccgacggcggcggcctttccggtgaaggccgagcct
gcggttgccgaagcgcccgtgagcgcgatctggtcccaggccttcggttcctggggctcg
acggacggcaacggcaacgccgcctccgtcaatcgcgacacgggcggatttttcatcggc
gccgacacgctgttcggcgactggcgccttggcgtgcttggcggctacagccggacgagc
ttcgacgtcaatgcgcgctcttcgaccggcgacagcgacaattatcacgcggccctctat
gcgggaacgaactggggggcggtgaacctgcgcgccggcgcggcctatacctggaacgac
gtgtccacctcgcgcttcgcgccgcttccgctccccgggacgctgaatgccgactacgac
gccggcacggcgcaggtgttcggcgaacttggctacggcatgagtttcggcgcggtggat
ttcgagccctttgtcggcctcgcctatgtgaatctcggcacggatgccttcgccgaaacc
ggcgggctggcggcgctctacagcccgagttcgacgatggatgccacctactcgacgctg
ggcctgcgcgcggcgtcgacggtcaatttcggccggacagtcgcgacgctcaaaggactg
ctgggctggcgccacgccttcggggacgtggattcgctgtcgacctacatgttcgagatg
ggcagcacgccgttcaccgtcgcgggcgtgcccattgccgaggactcgttgctggtcgat
gtcggaatgagcgtggcggtcaacgctttcgtgaatgtcggcatcgcctatagcggcgag
ttcggcgacggctcgaccgaccagagcgtgcgcggaagcctcgactggaagttctga
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