Ancylobacter sp. TS-1: GBB76_09535
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Entry
GBB76_09535 CDS
T06239
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
anc
Ancylobacter sp. TS-1
Pathway
anc03420
Nucleotide excision repair
anc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
anc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GBB76_09535
03430 Mismatch repair
GBB76_09535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anc03400
]
GBB76_09535
Enzymes [BR:
anc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBB76_09535
DNA repair and recombination proteins [BR:
anc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GBB76_09535
MMR (mismatch excision repair)
Other MMR factors
GBB76_09535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QFR33358
UniProt:
A0A5P8MZW1
LinkDB
All DBs
Position
complement(1991458..1993977)
Genome browser
AA seq
839 aa
AA seq
DB search
MADPRNPPNDDPFDLPFDLPGGDTRRETRDADDPFPAPAPRPGGIAARAAAMANPGRAAG
GRGVYLEGLNPEQREAVEATEGPVLVLAGAGTGKTRVLTTRIAHILSLGLAWPSQILAVT
FTNKAAREMKDRIGAMVGEEVEGMPWLGTFHSIGVRMLRRHAELVGLKSGFTILDTDDQI
RLLKQLLQADGIDEKRWPARLLANIIDGWKNRGLGPERVPAGEGATFANGKGQVLYAAYQ
ARLKALNAVDFGDLLLESIRLLRENPDVLADYHRRFRYILVDEYQDTNVAQYLWLRLLAQ
GSRNVCCVGDDDQSIYGWRGAEVDNILRFDSDFPGAKVVRLERNYRSTGHILGAAAHLIA
HNEGRLGKTLFSEGERGEKVTVTGAWDSQEEARAIGEEIEQLQRQGHALTQVAILVRASF
QMREFEDRFVTLGLNYRVIGGPRFYERAEIRDALAYLRVIASPSDDLAFERIVNVPKRGL
GDAALRQIHDHARAAQLPLVEAARELVASEELKPKVRLTLRDLVASFDRWREQMATMPHH
ELAEIVLDESGYTEMWQKDRSADANGRLENLKELVRSMEPFENLIGFLEHISLVMDVDGG
AGGDAVNIMTLHSAKGLEFDTVFLPGWEEGVFPNQRALDEQGRAGLEEERRLAYVGLTRA
RRRAKVFFASNRRIHGLWQSAVPSRFLDELSEGDVEVTESRGGSGWGGGQSGRFGYGPSR
FDEAQSFGSSYSTPGWQRAQARQEGGRSGGGFSGGGSSGGGFAERPSRFEANERARGRLI
EGELIAKSTGAPSRFALGERVFHQKFGYGDVTSVEGNKLTVLFDKAGEKKVVDSFVEAA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
ttggccgatccccgtaatccgccgaacgacgatccgttcgaccttcccttcgacctgccg
ggcggcgacacgcggcgggagacccgtgacgcggacgatccgtttcccgcgccggcgccc
cgccccggcggcatcgccgcgcgggcggcggcgatggccaatcccggccgggcggccggc
gggcgcggcgtctatctggaggggctgaaccccgagcagcgcgaggcggtggaggccacc
gaaggccccgtgctggtgctggccggcgccggcaccggcaagacgcgcgtgctcaccacc
cgcatcgcccatatcctctcgctcggcctcgcctggccctcgcagatcctcgccgtgacc
ttcaccaacaaggccgcgcgcgagatgaaggaccgtatcggcgccatggtcggcgaggag
gtggaaggcatgccctggctcggcaccttccactccatcggcgtgcgcatgctgcgccgg
cacgccgaactggtggggctcaagtccggcttcaccatcctcgataccgacgaccagata
aggttgctcaagcagcttctgcaggcggacgggattgacgagaagcgctggccggcgcgg
ctgctcgccaacatcatcgacggctggaagaatcgcggactcgggcccgagcgggtgccg
gccggcgagggcgcgaccttcgccaatggcaaggggcaggtgctctacgccgcctatcag
gctcggctgaaggcgctcaacgcggtcgatttcggcgatctgctgctggagagcatccgc
ctgctgcgcgagaacccggacgtgctggccgactatcaccggcggttccgctacattctc
gtcgacgaatatcaggacaccaacgtcgcccagtatctgtggctgcgcctgctggcgcag
ggctcgcgcaacgtctgctgcgtcggcgatgacgaccagtcgatctatggctggcgcggc
gcggaggtggacaacatcctgcgcttcgacagcgatttccccggcgccaaggtggtgcgg
ctggagcgcaactaccgctccaccgggcatatcctcggcgcggcggcgcatctgatcgcc
cataatgaggggcggctcggcaagacgctgttctccgagggcgagcgcggcgagaaggtg
acggtgacgggcgcctgggacagccaggaggaagcccgcgccatcggcgaggagatcgag
cagctccagcgccagggccacgcgttgacccaggtcgccatcctcgtgcgcgcctccttc
cagatgcgcgaattcgaggaccgcttcgtcacgctggggctcaactaccgggtcatcggc
ggcccgcgcttctacgagcgcgccgagatccgcgacgcgttggcctatctgcgcgtcatc
gcctcgccctccgacgacctcgccttcgagcgcatcgtgaatgtgcccaagcgcgggctg
ggcgacgcggcgctgcggcagatccacgaccacgcccgcgcggcgcagcttccgctcgtc
gaggcggcccgcgaactggtcgccagcgaggagctgaagccgaaggtgcggctgaccctg
cgcgatctcgtcgcgtccttcgaccgctggcgcgagcagatggcgacgatgccgcaccac
gagctggccgagatcgtgctcgacgagagcggctataccgagatgtggcagaaggaccgc
tcggccgacgccaatggccggctggagaacctgaaggaactcgtgcgctcgatggagccg
ttcgagaacctgatcggcttcctcgagcacatctcgctggtgatggatgtcgacggcggc
gccggcggcgacgcggtcaacatcatgacgctgcattcggccaaggggctcgaattcgac
accgtgttcctgcccggctgggaggagggcgtgttcccgaaccagcgcgcgctcgacgag
cagggccgcgccgggctggaggaggagcgccgcctcgcctatgtcggcctcacccgcgcg
cgtcggcgggccaaggtgttcttcgcctccaaccggcgcatccatgggctttggcaatcg
gccgtgccgagccgcttcctcgacgaattgtcggaaggcgacgtcgaggtgacggaatcg
cgcggtggctccggctggggcggcgggcagtcgggccgcttcggctacgggccgagccgc
ttcgacgaggcgcagagcttcggctcctcctattccacgccgggctggcaacgcgcgcag
gcgcgccaggagggcgggcgttcgggcgggggcttttcggggggcggctcttcgggcggc
ggcttcgccgagcgcccctcgcgcttcgaggcgaacgagcgcgcgcgcggccggctgatc
gagggcgagttgatcgccaagtcgaccggcgccccctcgcgcttcgcccttggcgagcgg
gtgttccaccagaagttcggctatggcgacgtgacctcggtggagggcaacaagctgacc
gtgctgttcgacaaggccggcgagaagaaggtggtcgacagcttcgtcgaggcggcgtga
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