Ancylobacter sp. TS-1: GBB76_16385
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Entry
GBB76_16385 CDS
T06239
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
anc
Ancylobacter sp. TS-1
Brite
KEGG Orthology (KO) [BR:
anc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anc03400
]
GBB76_16385 (addA)
Enzymes [BR:
anc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBB76_16385 (addA)
DNA repair and recombination proteins [BR:
anc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GBB76_16385 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QFR34561
UniProt:
A0A5P8N1D3
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All DBs
Position
3500032..3503460
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AA seq
1142 aa
AA seq
DB search
MSDPNALAPGPLRAATALQTTASDPMLSAWVSANAGSGKTHVLARRVIRLLMRGVPPGRI
LCLTYTKAAAANMANRVLGELRRWSTLDDAALDAEIVRTDGGSPGAQRRAQARRLFAQAL
ETPGGLKIQTIHAFCGALLHAFPFEAGVPAGFGELEEAARLELLARVREEVVLEAAGAPG
SELGRALALLVGITSDEGIGELIKELVADAPALEATDAELAAAVGLDRPVEASAVERAIV
EEALVPRGAWQGLGEALALEAGNAARRGRALLAAAAAPPDAVADAYADVFLKDDGEPYGD
SQFGAAPVRARFPQLLAERDRIAPLARRLAAARACERSRAVLILGREAARRYERAKAARG
VLDFADLVDAARRLLASGASAWVHYKLDQGIDHVLLDEAQDTSPEQWEVIRPLVAEFFAG
EGARESRGLPRTLFVVGDEKQSIFSFQGADPRRFDTVRREFEAAAGAHFAHVELQHSFRS
APGILEAVDEVFGVEASYRGLSAESKPPVHAPIHAALPSLVEMWEPEAPSEKVDVDAWQR
PLDAPASDDPKGRLARKIAAHIAARIRDRFPVTGRHGTRPARPGDFLILVRRRDSLFEAV
IRELKHARVAVAGADRLVVAQHIAVMDLMALGDALLSPDDELALACALKSPLFGFDDADL
MALAPGRTGRLEHTLLARAGESLKWAAAARRLARLRGEARRLRPFDFYARVLGRERGRAA
MLSRLGPEAADALDEMLALARAYENIEAPSLAGFLAFLRRGGAEAKRDMEAGRDEVRVMT
VHGAKGLEAPYVILADTTSGPMTRRSAGLLRVERPDGRRVLLHAPSKGDDTPAMAGARQA
GDAAQQDEYRRLLYVALTRAETALVLCGADGARGRPADCWYDLVRGALEPEAAEYPATGF
AGSVLRWRGAGAEPAGAPEATPSLDVPAWDAAERALARALAVPVGGPLLRTGLRPSAAGP
GIAPDVPPDAAAARALERGDLLHRLMAALAGLPPQEREEPGRRLLAAASDWPAPAREELL
AEVLGVLALPELGALFASGSRAEVPLAGILDDGTPVSGRIDRLVVGPGHVLVADFKTDRH
VPRTPSAVPAAHIRQLGLYAALLRRLFPGRTVAAQLVYTAGPLVHALDAAALERAVESVT
SP
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacccgaacgcgcttgcgcccggcccgctgcgcgcggccaccgcattgcagacg
acggcctccgatccgatgctctcggcctgggtgtcggccaatgccggctcgggcaagacc
catgtgctggcgcggcgggtgatccgcctgctgatgcgcggcgtgccgcccgggcgcatc
ctgtgcctcacctacaccaaggcggcggcggccaacatggccaaccgcgtgctcggcgag
ctgcgccgctggtccaccctcgacgatgccgcgctcgacgccgagatcgtgcgcaccgac
ggcggctctcccggcgcgcagcggcgggcgcaggcgcggcggctgttcgcgcaggcgctg
gaaacgccgggcgggctgaagatccagaccatccacgccttctgcggcgcgctgctgcac
gccttccccttcgaggccggggtgcccgccggcttcggcgagctggaggaggccgcgcgc
ctcgaacttctcgcccgcgtccgcgaggaggtggtgctggaggccgccggcgcgcccggc
agcgagctgggacgggcgctggcactgctggtcggcatcacctccgacgagggcatcggc
gagctgatcaaggaactcgtcgccgacgcgccggcgctggaggcgaccgacgcggaactg
gccgccgccgtcggcctcgaccggccggtcgaggccagcgcggtcgagcgggccatcgtc
gaggaagcgctcgtcccgcgcggcgcctggcaggggctgggcgaggcgctcgccctcgag
gccggcaatgccgcccggcgcggaagggcgctgctcgccgccgccgccgcgccgccggac
gcggtggccgatgcctatgccgatgtcttcctgaaggacgatggcgagccctatggcgac
agccagttcggcgccgcgccggtgcgcgccagattcccccagcttctggccgagcgcgac
cgcatcgccccgctggcccgccgccttgccgccgcccgtgcctgcgagcgtagccgcgcg
gtgctgatcctcgggcgcgaggcggcccggcgctatgagcgcgccaaggcggcgcgcggc
gtgctcgacttcgccgatctcgtcgacgcggcccggcgcctgctggcctccggcgcctcg
gcctgggtgcactacaagctcgaccagggcatcgaccatgtgctgctggacgaggcgcag
gacaccagcccggagcaatgggaggtgatccgcccgctggtcgccgagttcttcgccggg
gagggcgcccgcgagagccggggcctgccgcgcaccctgttcgtggtgggcgacgagaag
cagtcgatcttctccttccagggcgccgatccgcgccgcttcgacacggtgcggcgcgaa
ttcgaggcggcggcgggtgcgcatttcgcccatgtcgagcttcagcactccttccgctcg
gcgccgggcattctcgaggcggtggacgaggtgttcggcgtcgaggcgtcctatcgcggt
ctttccgccgagtcgaaaccgcccgtccacgcgccgatccatgccgcgctgccctcgctg
gtcgagatgtgggagccggaggcgccgagcgagaaggtcgatgtcgacgcctggcagcgc
ccgctcgacgcccccgcttccgacgaccccaagggccggctcgcccgcaagatcgccgcc
cacatcgccgcgcgcatccgcgaccgctttcccgtcaccggccggcacggcacgcggccg
gcgcggccgggcgacttcctgatcctggtgcggcggcgcgattcgctgttcgaggcggtg
atccgcgagctcaagcatgcccgcgtcgcggtggccggcgccgaccggctggtggtggcc
cagcacatcgcggtgatggacctgatggcgctgggcgacgcgctgctctcgcccgacgac
gaactggcgctggcctgcgcgctgaagagcccgctcttcggcttcgacgatgcggacctg
atggcgctggcgccggggcgcaccggccggctggagcacacgctcctcgcccgggccggg
gagagcctcaaatgggccgccgccgcccggcggctggcgcggctgcgcggcgaggcgcgg
cgcctgcgccccttcgacttctatgcccgcgtgctggggcgcgagcgcgggcgtgccgcc
atgctctcccggctcggccccgaggcggccgacgcgctcgacgagatgctggcgctggcg
cgggcctatgagaacatcgaggcgccctcgctggcgggcttcctcgcctttctgcggcgc
ggcggcgccgaggccaagcgcgacatggaggccgggcgcgacgaggtgcgggtgatgacc
gtgcacggcgccaaggggcttgaggcgccctatgtcatccttgccgacaccacctcggga
ccgatgacccgccgcagcgccgggcttctgcgggtggagcggccggacgggcgccgcgtg
ctgctgcatgccccctccaagggggacgacacgccggccatggcgggcgcccggcaggcc
ggcgacgcggcgcagcaggacgaataccgccgtctgctctatgtcgcgctcacccgtgcc
gagaccgcgctggtgttgtgcggcgccgacggcgcccgcgggcgcccggccgattgctgg
tacgacctcgtgcgcggggcgctggagccggaggcggccgagtatcccgccaccggcttt
gccggcagcgtgctgcggtggcgcggtgcgggggcggagccggcgggcgcgccggaggcg
acgcccagcctcgacgttccggcctgggacgcggccgagcgcgcgctggcccgcgcgctc
gcggtgccggtcggcgggcctctcctgcgcaccgggctgcgcccctccgccgccggcccc
ggcatcgcgccggacgtcccgcccgatgcggcagccgcgcgcgcgctggaacgcggcgat
ctgctgcaccggctgatggcggcgctcgccggcctgccgccgcaggagcgggaggaaccg
ggccgtcgcctgctcgccgccgcctccgactggccggcaccggcgcgcgaggaactgctg
gcggaggttctcggcgtgctggcgctgccggaactcggcgcgctgttcgcctccggcagc
cgcgccgaggtgccgctggccggcattctcgacgacggcacgccggtctccgggcgcatc
gaccggctggttgtcggccccggccatgtgctggtcgccgacttcaagaccgaccgccat
gtgccgcgcacgccctcggcggtgccggcggcccatatccgccagctcggcctctacgcc
gcgctgctgcgccggctgttccccggccggacggtcgccgcgcaactggtctacaccgcc
ggcccgctggtccacgcgctcgatgccgccgcgctggagcgggcggtggaaagcgtcact
tcgccgtga
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