Anoxybacillus sp. PDR2: GRQ40_01625
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Entry
GRQ40_01625 CDS
T06397
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
and
Anoxybacillus sp. PDR2
Pathway
and03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
and00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GRQ40_01625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
and03019
]
GRQ40_01625
03009 Ribosome biogenesis [BR:
and03009
]
GRQ40_01625
Enzymes [BR:
and01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GRQ40_01625
Messenger RNA biogenesis [BR:
and03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GRQ40_01625
Ribosome biogenesis [BR:
and03009
]
Prokaryotic type
rRNA helicases
GRQ40_01625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QHC02827
LinkDB
All DBs
Position
321326..322741
Genome browser
AA seq
471 aa
AA seq
DB search
MTTFQELGLSNELMRAISRMGFEETTPIQAETIPLSLQNKDVIGQAQTGTGKTAAFGIPL
IEKINPKTDVIQGLVVAPTRELAIQVSEELYKIGAVKRVRILPIYGGQDIERQIRALKKR
PHIIVGTPGRIIDHINRKTIRLDHVHTVVLDEADEMLNMGFVDDIEAILSHVPTKRQTLL
FSATMPEPIRRIAERFMDNPQLVKVKAKEMTVPNIEQYYLEVQEKRKFDILTRLLDIQAP
ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAMTFVTPRETGQLHNIEKTTK
RKMERMRPPTLDEALEGQQRIAIEKLLAVVESENLSFYKRAAEELLEEHDSVSLVAACIK
MLTKEPDTTPVMLTEEPPLPAKKEKKRINRKGGQPKGAARSPQSKKRRVAR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcaagagttaggattaagtaatgaattaatgagagccataagtcgaatg
gggtttgaagaaaccactccgattcaagcagagaccattccattaagcctgcaaaataaa
gatgtgattgggcaggcacaaaccgggacaggaaaaacggccgcgttcggtattccgtta
attgaaaaaataaatccaaaaacggacgtgattcaagggcttgtcgttgctccgactcgc
gagcttgccattcaagtatctgaagagctctataaaattggagcggtcaaacgtgtccgt
attcttccaatttatggaggacaggatatcgaacgacaaattcgcgcattgaagaaacgc
ccgcatattattgttggaacaccaggaagaatcatcgatcatatcaatcgcaaaacgatt
cgtctagatcatgtgcataccgttgtgttagatgaagcagatgaaatgctgaacatggga
tttgttgatgatattgaagcgattttaagccatgtgccgacgaaaaggcagacgcttctt
ttttcagcaacgatgcctgagcctattcgccgcattgcggagcgcttcatggacaatccg
cagcttgtcaaagttaaagctaaagaaatgacggttcccaatattgagcaatactatcta
gaagttcaagaaaaaagaaaatttgatattttaacaaggctgctggatattcaagcgccg
gagctggcgattgtatttggccgtacgaaacggcgagtggatgagctggccgaagcgttg
aatttgcgcggttatgctgctgaaggaatccatggagatttaagccaagcgaagcggctg
tccgtgctgcgcaaatttaaagaaggagcaattgaaattttagtagcgactgatgtagca
gcacgcgggctagatatttccggcgttacacacgtgtataactttgacattccgcaggat
ccagaaagctatgttcatcgcatcggccgtacaggccgtgccggaaaaacaggaatggcc
atgacatttgtgacgcctcgcgaaacaggacagctgcacaatattgaaaaaacaacaaaa
cgcaaaatggaacggatgcggccgccgacgctcgacgaagcgctagaagggcagcagcga
attgcaattgagaagctcttggctgttgtggaaagcgagaatttatcgttttacaagcga
gctgccgaggagcttttagaagagcatgattccgtttctcttgtagccgcttgtatcaaa
atgttgacaaaggagccagatacaacaccggtaatgctgacggaagagccgccgctgcca
gccaaaaaagagaaaaagcggatcaatcgcaaaggcggacagccaaaaggggctgcgcga
agcccgcaatcgaaaaagcggcgcgtggcgcgataa
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