Anoxybacillus sp. PDR2: GRQ40_01960
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Entry
GRQ40_01960 CDS
T06397
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
and
Anoxybacillus sp. PDR2
Pathway
and03420
Nucleotide excision repair
and03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
and00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GRQ40_01960 (pcrA)
03430 Mismatch repair
GRQ40_01960 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
and03400
]
GRQ40_01960 (pcrA)
Enzymes [BR:
and01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GRQ40_01960 (pcrA)
DNA repair and recombination proteins [BR:
and03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GRQ40_01960 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GRQ40_01960 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Terminase_6N
DUF3641
Motif
Other DBs
NCBI-ProteinID:
QHC02870
LinkDB
All DBs
Position
382221..384419
Genome browser
AA seq
732 aa
AA seq
DB search
MNFLSNKLLANLNPEQQAAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNIL
AITFTNKAAREMKERVQSLVGGAAEEIWISTFHSMCVRILRRDIDRIGINRNFSILDATD
QLSVLKTILNDKNIDPKKFDPRAILGTISSAKNELLSPEKFAKKAATYYEKVVSDVYTEY
QQRLLRNHSLDFDDLIMVTIQLFERVPEVLEHYQYKFQYIHIDEYQDTNRAQYMLVKMLA
ARFQNLCVVGDSDQSIYRWRGADIQNILSFETDYPNAKVVLLEQNYRSTKRILQAANKVI
ENNYNRKPKRLWTENPEGKKIAYYEAMSESDEAQFVAGKIKEYVDSSKRRYSDFAILYRT
NAQSRMMEEVLIKSNIPYQIVGGLKFYDRKEIKDILAYLRLIANPNDDISLTRIINVPKR
GIGASSLDKIASYASAYGLSMFQALGELEHMGISARIAASLHEFRRQIEHWGQLQEYVSV
TELVEDVLEKSGYREMLEAEKTLEAQSRLENIDEFLSVTKHFENVSEDKSLIAFLTDLAL
VADIDQLNNEEETDKEAVVLMTLHSAKGLEFPVVFLIGMEEGIFPHSRSLDDEEEMEEER
RLAYVGITRAEEELFLTSAQMRTLFGRTNVNPASRFIGEIPDELVEQVNKTKRWPASEQA
RTKSVRLAAVPTTTGGEAVAWKVGDKAEHKKWGIGTVVSVRGDGDDKELDIAFQSPIGIK
RLLAKFAPITKV
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcttatccaataagctgcttgcgaatttgaatcccgagcagcaagcggccgtc
aaaacgacggaagggcctttattgatcatggctggagcgggaagcggaaagacgcgcgta
ttgacgcaccgtattgcttatttgatggcggaaaagcatgttgccccttggaacatttta
gcgattacctttacaaataaagcagcccgtgaaatgaaggagagggtgcaatcgcttgtc
ggcggagcggcggaagagatttggatctcgacgtttcattcgatgtgcgtgcgcattttg
cggcgcgatatcgaccgtattggcattaatcgcaacttttctattttagatgcgaccgat
cagctttcagtgctcaaaacgattttaaatgataaaaatatcgatccgaaaaaatttgat
ccgcgtgccattttaggaacgatcagcagcgctaaaaacgagctgctttctccggagaaa
tttgctaaaaaagcagctacttattatgaaaaagtggtaagcgatgtgtataccgaatat
caacagcgtcttctgcgcaaccattctcttgattttgacgacctaattatggtgacgatt
cagctgtttgaacgcgtgccggaagtgcttgagcattatcaatataaatttcagtatatt
catattgacgaatatcaggatacgaacagagcgcagtatatgcttgttaaaatgctggcc
gcgagatttcagaatttatgcgttgtcggtgattccgatcaatcgatttatcgctggcgt
ggagcggacattcaaaatatcttatcatttgaaacggactatcccaatgccaaagtagta
cttcttgaacaaaattatcgttcgaccaagcgcatcttacaagcggcgaacaaggtcatt
gaaaataactacaaccgcaagccaaaaagattatggaccgaaaatccggaaggaaaaaaa
atcgcctattatgaggcgatgagcgaatcagatgaagcgcaatttgtcgctggtaaaatt
aaagagtatgtggacagcagcaagcgccgctattcggatttcgccatattgtatcgcacg
aatgcccaatcgcggatgatggaggaagtgttgattaaatcgaatattccttatcaaatc
gtcggcggcttaaagttctatgaccgaaaagaaattaaagatattttggcgtatttgcgt
ttgatcgccaatccaaatgacgatattagtttgacgagaattatcaatgtgccaaagcgc
ggtatcggcgcttcatcgctcgataaaattgcaagctacgcttccgcatacggtctttcg
atgtttcaggcgcttggcgagcttgagcatatggggattagtgcgcgcattgccgcttcg
ttgcatgaatttcgtcggcaaatagagcattgggggcagctgcaagaatatgtatctgtt
acggagttggtagaggatgttttagagaagtcggggtaccgcgagatgcttgaagcggaa
aaaacattggaagcgcaaagccggcttgagaatattgatgaatttttatccgtaaccaaa
cattttgaaaatgtaagtgaagataaatcgctcatcgcctttttaacggatcttgcttta
gtggctgacattgaccagttaaacaatgaagaggaaacagacaaggaagccgttgtgctt
atgacgcttcactcggcaaaggggttagaattccctgtcgtttttttgatcggcatggaa
gaaggcatttttccacatagccgctcactcgacgatgaagaggaaatggaagaagagcgg
cgcttggcctatgtcggcattacccgcgccgaagaggaattgtttttaacaagcgcccaa
atgcgcaccctgttcggccgaacgaatgtgaatccagcttcgcgctttatcggggaaatt
cctgatgaattagtcgaacaggtgaataaaacgaagcgttggccagcaagcgaacaagcg
agaacgaagtccgttcgtttagctgcggtgccgacaacgacaggaggagaagcggtcgct
tggaaggtaggcgataaagcagagcataaaaagtggggaatcggaaccgttgtgagcgtg
cgcggagacggagacgacaaagagctggatatcgctttccaaagtccgattggaattaag
cgattattagctaaatttgccccgattacgaaggtctag
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