Anoxybacillus sp. PDR2: GRQ40_14480
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Entry
GRQ40_14480 CDS
T06397
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
and
Anoxybacillus sp. PDR2
Pathway
and03030
DNA replication
and03410
Base excision repair
and03420
Nucleotide excision repair
and03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
and00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GRQ40_14480 (polA)
03410 Base excision repair
GRQ40_14480 (polA)
03420 Nucleotide excision repair
GRQ40_14480 (polA)
03440 Homologous recombination
GRQ40_14480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
and03032
]
GRQ40_14480 (polA)
03400 DNA repair and recombination proteins [BR:
and03400
]
GRQ40_14480 (polA)
Enzymes [BR:
and01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GRQ40_14480 (polA)
DNA replication proteins [BR:
and03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GRQ40_14480 (polA)
DNA repair and recombination proteins [BR:
and03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GRQ40_14480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GRQ40_14480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Pro_sub2
Motif
Other DBs
NCBI-ProteinID:
QHC05038
LinkDB
All DBs
Position
complement(3008342..3010975)
Genome browser
AA seq
877 aa
AA seq
DB search
MRKKLVLIDGNSIAYRAFFALPLLHNEKGIHTNAVYGFTMMLMKILEEEKPTHMLVAFDA
GKTTFRHETFQDYKGGRQKTPPELSEQFPLLRELLDAYQIRSYELDNYEADDIIGTLCTK
AEQEGFEIKVISGDRDLTQLASEHVTVAITRKGITDVEPYTPETIQEKYGLTPPQIVDLK
GLMGDASDNIPGVPGVGEKTALKLLKEFGTVERLLESIEQVSGNKLKENLKENRELALLS
KQLAAILRDAPLEITLEETKYAGYNLDKVIALFKELGFNSLLGKLEQNEDPDVQTELANI
DYETVEEVDETMLADEAALIVEVLEANYHKAPILGFALAGEKKTLFIPTDVALSSPIFKA
WLEDEKKKKSVFDAKRALVALKWQGIEMRGIDFDLLIASYLLNPSHSTDDVASVAKTKQY
TEVQPDEAVYGKGAKQAIPDKKSLADHLVRKAVAIRALKREFVADLKANEQYLLFTELEL
PLTLILAEMEFTGVKVDVQRLRNMGEELNEQLKMIEQDIYQSAGQEFNINSPKQLGVVLF
EKLQLPVIKKTKTGYSTSADVLEKLAPYHEIVEKILHYRQLGKLYSTYVEGLLKVVHQDT
NKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFIPSEPDWVIFAADYSQIEL
RVLAHIANDQNLIEAFRNDLDIHTKTAMDIFHVSEEKVTSQMRRQAKAVNFGIVYGISDY
GLSQNLNISRKEAAQFIERYFASFPGVKQYMEDIVRHAKQTGYVTTLLHRRRYLPDITSR
NFNLRSFAERTAMNTPIQGSAADIIKKAMIDLAERLKQEELQARILLQVHDELILEAPKS
EIERLKQLVPEVMEQAIELRVPLKVDYHFGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaaaaaaacttgtactcattgacggcaatagcatcgcgtatcgtgcgtttttcgca
ttgccgcttttacataatgaaaaaggcatccatacgaatgctgtctatggatttacgatg
atgctgatgaaaattttggaggaagaaaagccgacacacatgcttgtcgcttttgatgct
ggaaaaaccacttttcgccatgaaacttttcaagattataaaggtggaaggcaaaaaact
ccaccggagctatccgagcaattcccgcttttgcgtgagttgctagatgcctatcaaatt
cgctcgtacgagcttgataactacgaggcagacgacattatcggcacgctttgcacaaaa
gcagagcaagaaggatttgaaattaaggtgatttcaggcgaccgcgatttaacacaactt
gcttctgagcatgtaaccgttgcgattactcgcaaaggaattacggatgtggaaccgtat
acgccagaaacgattcaagagaaatatgggcttactccaccgcaaattgtggatttaaaa
ggtcttatgggagatgcatcggacaatattccaggagtgccgggtgttggtgaaaaaaca
gcgttaaaattgctgaaggaatttggcactgttgaacggcttttagaatccattgaacag
gtcagcggaaacaaattgaaagaaaacctgaaggagaatcgcgaactggcgcttcttagc
aagcagttagccgccatcttgcgcgatgctccgcttgaaatcacattagaagagacgaaa
tatgcaggctacaatcttgataaggtgatcgctttatttaaagagcttggatttaattcc
ttgctagggaagctggaacagaatgaagacccggatgttcagacagagttagcgaacatt
gattatgaaacggttgaagaagtggacgagaccatgctggcagacgaagcggcattgatt
gtggaggtgcttgaagcaaactatcacaaagcgccgattcttggttttgcattggccggc
gaaaagaaaactctgtttattccgaccgatgtcgccttatcatcgccgatttttaaggct
tggcttgaggatgagaaaaagaagaaaagcgtatttgatgctaaaagagcgctcgtcgct
ttaaaatggcagggcattgaaatgagagggatcgattttgatttgctcattgcttcgtac
cttttaaatccttcacattcaaccgacgatgtcgcctctgtagctaaaactaagcaatat
acagaagtacagccggatgaagcggtatatggaaaaggtgcgaaacaggcaatccctgat
aaaaaaagcttagctgaccatctcgttcgcaaagccgtagcgattcgagccttaaaacga
gaattcgttgctgatctcaaagcaaacgagcaatatttgttatttactgaactcgaattg
ccgttgacgctcattttagcagaaatggaattcaccggggtcaaagtggatgtccaaagg
ctgcgtaatatgggagaagagcttaacgagcagttgaagatgatcgagcaagacatttac
caatctgcggggcaagaatttaatattaattcgccaaaacaactgggagtagtgttattt
gaaaaattgcagctgccggttatcaagaaaacaaaaacaggctattccacttctgccgat
gtattagaaaagctggctccttaccatgaaattgtggagaaaattcttcattaccgccag
cttggaaagctgtattctacttatgtagagggattactaaaagtagtgcatcaggataca
aataaggtgcataccatctttaaccaagcgctgacccaaaccggacgtctcagctcgaca
gaaccgaacttgcaaaatattccgatccgtctggaagaaggacgaaaaatccgtcaggcg
tttattccatcagaaccggattgggtgatttttgcggctgattattcacaaattgagctg
cgcgttcttgcacatatcgccaatgatcaaaatttaattgaagcgtttcgcaatgatctt
gatattcatacaaaaacagccatggatatttttcatgtaagtgaagaaaaagtgacatca
caaatgcgccgccaagcaaaggctgttaattttggcattgtatacggtattagcgattac
ggtttatcgcaaaacttgaatatttcaagaaaggaagcagcgcaatttattgaacggtat
tttgcaagctttcctggagttaagcaatacatggaggatattgttcgccatgccaaacaa
acaggttatgtgactacgctgttgcatcgccgtcgctatttgccggatattacgagccgg
aattttaatctgcgcagttttgccgaacgaacagcgatgaatacgccgattcaaggaagt
gcggccgatattataaaaaaagcgatgattgatttagctgagcggttgaagcaggaggag
ctgcaagcgcgaattttgctgcaggtgcacgatgagctaattttagaagcgccgaaatca
gagattgagcggctgaagcagcttgttccggaagtgatggaacaagccattgaactgcgt
gtgccgctgaaagtcgattaccattttggaccgacttggtatgatgcgaaatag
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integrated database retrieval system