Actinomyces naeslundii: ATCC27039_10610
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Entry
ATCC27039_10610 CDS
T05566
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ane
Actinomyces naeslundii
Brite
KEGG Orthology (KO) [BR:
ane00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ane03016
]
ATCC27039_10610
Enzymes [BR:
ane01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ATCC27039_10610
Transfer RNA biogenesis [BR:
ane03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ATCC27039_10610
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BDH76935
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Position
1224041..1225363
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AA seq
440 aa
AA seq
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MTTRATGASRPAASSAVPHPAVPPGTTDHPISPHDVVDYPCPRDGLPEIIGTPAQLSRAA
RSLAAGQGPVALDAERASGFRYGQDAYLVQLRREGVGTLLIDPITCGPLTDLATALDGPE
WILHAADQDIPCLTMLGLKAASLFDTELAARLLGRQHVGLGAVIEETLGLRLAKDHAAAD
WSTRPLPTSWLIYAALDVELLIDLRDALAVELEAAGKAQWATQEFEHIRTRPAKPAKIDP
WRKTPRAGSTVRSPRSLAILRELWTSREELAAELDRTPSKVLSHQALIAAAVARPRSRRK
MNALKEFSSRQARQNQERWWRAIERALEMPEEELPPTRAPMGPEELPHPRTWQRHHAEAA
DQLNRVRGAIRQRAEEIRVPQELLLAPGCQRRLAWDLGEEIESGHAGGVSAQKISERLAV
MGARPWQIEQATPALATALR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacccgcgcaaccggcgcctcgcgcccagccgcgtcctcggccgtaccccaccca
gccgtcccccccggcacaacagatcaccccatcagcccgcacgacgtcgtcgactacccg
tgtccccgggacggcctgccggagatcatcggtactcccgcccagctgagccgggccgcc
cggagcctggccgctggacagggccctgtggccctcgacgccgagcgcgcctccggcttc
cgctacggacaggacgcctatctcgtccagctcagacgtgagggtgtcggcacccttctc
atcgatcccatcacctgcggtccgctgaccgacctggccaccgctctcgatggtcctgag
tggattcttcacgccgccgaccaggacatcccctgcctgaccatgctcgggctgaaagcc
gcgtccctgttcgacaccgagctggccgcccgcctcctgggacgtcagcacgtcgggctc
ggcgccgtcatcgaggagaccctgggccttcgcctggccaaggaccacgccgcagcagac
tggtccaccaggcccctgcccacctcctggctcatctacgccgccctcgacgtcgagctc
ctcatcgacctgcgcgacgccctggccgttgagctcgaggcagccggtaaggcccagtgg
gcgactcaggagttcgagcacatacggaccaggccggccaagcccgccaagatcgaccca
tggcgtaagacaccgcgtgccggaagcaccgtacgctctccccggtccctcgcgatcctg
cgtgagctgtggacctcacgcgaagagctggccgccgagctcgaccggacgccgtccaag
gtcctgtcccaccaggcgctcattgccgccgccgtcgcccggcctcgatcacggcgcaag
atgaacgcactgaaggagttctcctcccgacaggcgcgccagaaccaggagcgctggtgg
cgggccattgagcgcgccctggagatgcccgaggaggagctaccccccacccgtgctccc
atgggccccgaggagctcccccacccgcgcacctggcagcgccaccacgctgaagcggcg
gaccagctcaaccgcgtacgtggagccatcaggcagcgcgccgaggagattcgcgtgccc
caggagctcctcctggcgccgggatgccagcgccgtctggcctgggaccttggtgaggag
atcgagtcgggacacgccggcggcgtcagtgctcagaagatcagcgaacgcctggccgtc
atgggagccaggccgtggcagatcgagcaggccaccccggccctcgcgacagcactgcgc
tga
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