Actinomyces naeslundii: ATCC27039_12060
Help
Entry
ATCC27039_12060 CDS
T05566
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ane
Actinomyces naeslundii
Pathway
ane03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ane00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATCC27039_12060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ane03019
]
ATCC27039_12060
03400 DNA repair and recombination proteins [BR:
ane03400
]
ATCC27039_12060
Enzymes [BR:
ane01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATCC27039_12060
Messenger RNA biogenesis [BR:
ane03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ATCC27039_12060
DNA repair and recombination proteins [BR:
ane03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATCC27039_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Pribosyltran
ResIII
Pribosyl_synth
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
BDH77080
LinkDB
All DBs
Position
1396357..1398678
Genome browser
AA seq
773 aa
AA seq
DB search
MTIPGTEDPQPLASPLRERAEAVLRELVGRSDARLREDQWRAIEALVLAHRRVLVVQRTG
WGKSAVYFVATVLLREGWGDWRPGTPPPVSGTRSRSGVVGTSVIISPLLALMRDQVAAAE
RAGIRAVTMNSANVTQWEEIETRVRAGEVDVLLVSPERLNNPVFRDEILPHLAAGAALVV
IDEAHCISDWGHDFRPDYRRIRTLLAGLPPRTPVLATTATANARVSADVAEQLGASLSAT
GADGSDDSPVLVLRGSLERRSLHLGVKVLPDSATRLAWLAGYLRHAPGSGIVYCLTVSAT
LEVAEYLRTAGVGVAAYTGQTDAAERERLEEDLKANRVRALVATSALGMGFDKPDLAFVV
HVGAPSSPVSYYQQVGRAGRGVERAEVVLLPGDEDRAIWEWFGSQGFPPEDQVRTVLAGL
DKQRESGAGPMSTAVLETVTSLRRTRLESMLKVLDVDGAVRRVRGGWESTGQPWSYDAQR
YARVDAARLAEQEAMIAYERLGADAGPATTVVPCRMAFLRSALDDPHLDREWRCGACDLC
GGLELPDAPDEKQVSAARQALGRAGFELRARRQWPTGMERLGLGRLKGRISAEQQAATGL
AVGRLDGLGPSAALRELVTSDSDGEVPVHVRPLVLEAVDRLGEIIQGDQDPVRTETLSRP
IVVVIVDSRSRPHLVRQLGRAVATRLGARPLGIVGHTDQDPPRHDVGSAFRLAQVARDLT
LQGWPAQALEELRGSVVVLVDDWSDSGWTLTVAARLLREAGAAAVHPFVLAQR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcccgggcactgaggacccgcagccactcgcctcgccgctgcgtgagcgcgcc
gaggccgtcctgcgcgagctcgtgggccgcagcgatgcgcgcctgcgcgaggaccagtgg
cgggcgatcgaggcgttggttctcgcccaccgccgggttctggtggtccagcgcactggc
tggggaaaatcggcggtgtacttcgtggcgacggtgctgctgcgtgagggctggggggac
tggcgacccggcacaccgccgcccgtatccggcactcgcagccggtccggagtcgtcggg
acgagcgtcatcatctcgccgctgcttgccctgatgcgcgaccaggtcgccgccgctgag
cgtgccgggatccgggccgtgaccatgaactcggccaacgtcacccagtgggaggagatc
gagacccgggtgcgtgcaggcgaggtggatgtcctgctggtctcccccgagcgactcaac
aaccctgtgttccgtgacgagatcctgccgcacctggcggccggagccgcactggtggtc
atcgacgaggcccactgcatctcggactgggggcacgacttccgcccggactatcggcgc
attcgcacattgctggccggtctgccaccgcgcaccccggtcctggcgaccacggcgacc
gcgaacgcccgggtcagtgccgacgtcgccgagcagctgggggcgtccctgagcgcgacc
ggagccgatggctcggacgactccccggtcctggtgctgcgcggctccctggaacgccgc
tccctgcacctgggggtcaaggtcctgccggactcggccacccgcctggcatggcttgcc
ggctacctcaggcacgcccctggaagcggcatcgtctactgcttgaccgtctcggcgacg
ctggaggttgccgagtacctgcgcaccgcgggtgtgggggtagccgcctacacggggcag
accgacgccgccgagcgtgagcgcctcgaggaggatctcaaggccaaccgggtcagggcg
ctggtggcgacctcggccctgggcatgggctttgacaagccggatctggccttcgtggtg
cacgtgggggcaccgtcctcgccagtgagctactaccagcaggtggggcgcgccggtcgt
ggcgtggagcgggccgaggtggtcctgctgccgggggacgaggaccgcgccatctgggag
tggttcggctcccagggcttccctcccgaggaccaggttcgtacggtcctggccggactg
gacaagcagcgggagtcgggggccgggccgatgtcgacggcggtgctggagacagtgacc
tcgttgcggcgcacccggttggagtccatgctcaaggtccttgacgtcgacggcgccgtg
cgccgggtacgcggtggctgggagtccaccggtcagccctggtcctatgacgcccagcgt
tatgccagagtcgatgccgcacgcctggccgagcaggaggcgatgatcgcctatgagcgg
ctcggcgccgatgccggtcccgcgacgactgtcgtcccctgccggatggcattcctgagg
tcggcgctcgatgatccgcacctcgaccgggaatggcgctgcggagcctgcgacctgtgc
ggaggcctggagctgcccgacgccccggatgagaagcaggtcagtgccgctcgacaggca
ctcggtcgcgccgggttcgagctacgagcgcgccgtcagtggcccaccgggatggagagg
ctggggctgggccgcctcaagggtcgtatcagtgccgagcagcaggcggcgaccggtctg
gctgtggggcggttggatggcttgggaccctcggcagcgctgcgtgagctggtgacctcc
gactccgacggcgaggtcccggtgcatgtcaggccactggtgcttgaggcggtggaccgg
ctcggcgagatcatccagggcgatcaggaccccgttcgcaccgaaacgctgagcaggccg
atcgtcgtcgtcattgtggactctcgttcccgcccccacctggttcgccagctggggcgc
gccgtggccacgcgcttgggcgccaggccgctggggatcgtcgggcataccgaccaggat
cccccgcgccacgacgtgggctctgcgttccgcctggcgcaggtggcccgtgacctgacg
cttcaggggtggccggcgcaggcgcttgaggagcttcggggcagcgtcgtcgtcctggtg
gatgactggagcgactccggctggacactcacggtggcggcccgcctcctgcgagaggcg
ggggcggcagcggttcaccccttcgtcctggcgcagcggtag
DBGET
integrated database retrieval system
