Actinomyces naeslundii: ATCC27039_13180
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Entry
ATCC27039_13180 CDS
T05566
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ane
Actinomyces naeslundii
Pathway
ane02024
Quorum sensing
ane03060
Protein export
ane03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ane00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ATCC27039_13180 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ATCC27039_13180 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATCC27039_13180 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ane02044
]
ATCC27039_13180 (ffh)
Enzymes [BR:
ane01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ATCC27039_13180 (ffh)
Secretion system [BR:
ane02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ATCC27039_13180 (ffh)
Eukaryotic Sec-SRP protein
ATCC27039_13180 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_31
MeaB
VirC1
ArsA_ATPase
nSTAND3
AAA_22
APS_kinase
Zeta_toxin
AAA_30
cobW
AAA_24
MobB
AAA_16
AAA_18
NPHP3_N
AAA_33
CBP_BcsQ
Thymidylate_kin
6PF2K
Motif
Other DBs
NCBI-ProteinID:
BDH77192
LinkDB
All DBs
Position
complement(1531247..1532935)
Genome browser
AA seq
562 aa
AA seq
DB search
MFGNLSDRITASFNQLRGKGRLTEADVNATVTEIRRALLEADVALPVVRAFTSAVREKAV
DAARSQALNPGQQVVKIVNEELIEVLGGETREINWADRGPTIIMLAGLQGAGKTTLAGKL
GRWLRDQGKRVLLVASDLQRPNAVTQLSVVAERAGVHVWAPEPGNGVGDPVAVARSGVEQ
ARTNGYDVVVVDTAGRLGVDAEMMDQAIRIRDAVVPHEILFVLDAMVGQDAVNTSVAFRD
GVGFTGVVLSKLDGDARGGAALSVRGVTGAPVLFSSTGEGLTDFERFHADRMASRILDMG
DLLTLIEQAERTLDRQEAEDAAAKLAKGTFTLDDFLGQLRQIRKMGSMKKLLGMMPGMGQ
MREALENFDEREVDRIEAIVCSMTPAERKDLSILNGSRRSRIAKGSGTTVQAVNELVDRF
EQAKKMMEAMASGGGMGGLGEGGPMPGMGSLPGMGKHSKARQAPKAKRGKGGKKGRSGNP
AKAARQAKEAAAAKQAKIEAGQGGAPAAGSSFGLGGGQAGASGYGIMPQAQQQAQAGAQP
SGDDVADAMGALPEDLRRHLGL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgttcggcaacctctccgatcgcatcaccgcctccttcaaccagctgcgcggcaaaggt
cgtctcaccgaggccgacgtcaacgccacggtcaccgagatccgccgcgccctcctggag
gccgacgtcgccctgcccgtggtgcgcgccttcacctccgcggtgcgcgagaaggcggtc
gacgccgcccgctcccaggccctcaacccgggccagcaggtcgtcaagatcgtcaacgag
gagctcatcgaggtcctgggcggcgagacccgggagatcaactgggccgaccgcggcccc
acgatcatcatgctcgccggtctccagggcgccggtaagaccaccctggccgggaagctc
ggccgctggctgcgcgaccagggcaagcgcgtcctgctggtggcctccgacctccagcgc
cccaacgccgtcacgcagctgagcgtcgtcgccgagcgcgccggggtgcacgtgtgggcg
cccgagcccggtaacggcgtgggtgacccggtggccgtggcccgctccggcgtcgagcag
gcacgcactaacggttacgatgtcgtcgtcgtggacaccgccggccgcctgggcgtggac
gccgagatgatggaccaggcgatccgcatccgcgacgccgtcgtcccccacgagatcctc
ttcgtcctggacgccatggtcggtcaggacgccgtcaacacctcggtcgcattccgcgac
ggcgtcggcttcaccggcgtggtcctctccaagctcgacggcgacgcccgcggcggtgcg
gccctgtccgtgcgcggcgtcaccggcgccccggtcctgttctcctccaccggcgagggc
ctgaccgacttcgagcgcttccacgccgaccgcatggcctcgcgcatcctggacatgggt
gacctgctcaccctcattgagcaggccgagcggaccctggaccgccaggaggccgaggac
gccgccgccaagctcgccaagggtaccttcaccctcgacgacttcctgggccagctgcgc
cagatccgcaagatgggctccatgaagaagctcctgggcatgatgcccggcatggggcag
atgcgtgaggccctggagaacttcgacgagcgcgaggtcgaccgcatcgaggcgatcgtg
tgctccatgactccggccgagcgcaaggacctgtccatcctcaacggctcgcgccgcagc
cgcatcgccaagggatcgggcaccaccgtccaggccgtcaatgagctcgtggaccgcttc
gagcaggccaagaagatgatggaggccatggcctccggcggaggcatgggcggactcggt
gagggcggtcccatgcccggcatggggtcgctgcccggcatgggcaagcactccaaggcc
cgtcaggcccccaaggccaaacgcggcaagggcggtaagaagggccgcagcggcaacccc
gccaaggccgcccgccaggccaaggaggccgcagccgctaagcaggccaagatcgaggcc
ggtcagggcggcgcaccagcagccggctcctccttcggactcggcggcggccaggccggc
gcctccggctacgggatcatgccccaggcccagcagcaggctcaggccggtgcgcagccc
tcgggcgacgacgtcgccgatgccatgggcgccctgcccgaggacctgcgccgccacctc
gggctgtag
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