Actinomyces naeslundii: ATCC27039_14400
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Entry
ATCC27039_14400 CDS
T05566
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ane
Actinomyces naeslundii
Pathway
ane03420
Nucleotide excision repair
ane03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ane00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATCC27039_14400
03430 Mismatch repair
ATCC27039_14400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ane03400
]
ATCC27039_14400
Enzymes [BR:
ane01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATCC27039_14400
DNA repair and recombination proteins [BR:
ane03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATCC27039_14400
MMR (mismatch excision repair)
Other MMR factors
ATCC27039_14400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BDH77314
LinkDB
All DBs
Position
complement(1689994..1692114)
Genome browser
AA seq
706 aa
AA seq
DB search
MSPTTPRPAPIGTPKRRHSAQLDAAGLLTALDPDQREVAEHLEGPLCVLAGAGTGKTRAI
TYRIAHGVATGAYQATQVLAVTFTARAAGEMRSRLADLGVPGVQARTFHAAALRQLTYFW
PTAIGGRRPDIQAHKAPLVGAAARRLGLPTDRATVRDLAAEVEWAKVTMTLPEDYAQVAV
AAGRTGVAGQEAATVAQVLSLYEEAKSERGVIDFEDVLLLTIGILLDREDIAAQVRGQYK
HFVVDEYQDVSPLQQRLLDLWLGRRRQLCVVGDVSQTIYSFTGATPAFLTGFTTRYEGAR
TVRLSRDYRSTPQVVSLANRVLSRSRRGGGGLHLPAGAVELVAQRPSGPAVRFETYDDDV
AEAEGAVAQVRRLQAAGVPLSEIAILYRTNSQSEVFEQALAGAQIGYLVRGGERFFEREE
VKRAMAVILGAARTEKATLTGDLGLDARTVLAREGWSEEPPAPRGAVRERWDALNALVAL
ADEMSQTRGADLDAFHTELRERADAQNAPTVEGVTLSSLHAAKGLEWDAVILAGACEGLL
PISLAEGQAAIEEERRLLYVGVTRAREHLIISYARARNAGGRAARKPSRFLDGLWPTAQG
SRDASRRQGRLSAKERSRQSAADFEASNDPRTIALFEELRAWRSGVAKERSKPAYTVFAD
ATLRDIAVVKPTTLPQLSLIRGVGATKLQEYGGSVLALLRDFESGS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgaccaccccccgccccgccccgatcggcacgccgaagcgccggcacagcgct
cagctggacgccgccggcctcctgacggccctcgaccccgaccagcgcgaggtcgccgag
cacctcgaaggacccctgtgcgtcctggccggcgccggcaccggcaagacccgggccatc
acctaccgcatcgcccacggcgtggccaccggcgcctaccaggccacccaggtcctggcc
gtcaccttcaccgcccgcgccgccggcgagatgcgctcgcgcctggccgacctcggcgtc
cccggggtccaggcccgcaccttccacgccgccgccctgcgccagctcacctacttctgg
cccaccgccatcggtggacgccgccccgacatccaggcccacaaggcgcccctggtcggt
gccgccgcccgccgcctgggcctgcccaccgaccgggccaccgtgcgggacctggccgcc
gaggtcgagtgggccaaggtcaccatgaccctgcccgaggactacgcccaggtcgccgtg
gccgccggccgcaccggcgtggccggccaggaggcggccacggtcgcccaggtcctgtcc
ctctacgaggaggccaagagcgagcgcggcgtcatcgacttcgaggacgtgctcctgctg
accatcggcatcctcctggaccgcgaggacatcgccgcccaggtgcgcggccagtacaag
cacttcgtcgtcgacgagtaccaggacgtctccccgctccagcagcgcctgctggacctg
tggctggggcggcgccgtcagctgtgcgtcgtcggcgacgtctcccagaccatctactcc
ttcaccggggccacgcccgcgttcctcaccggcttcaccacccgctacgagggtgcgcgc
accgtgcgcctgagccgcgactaccgctccaccccgcaggtggtctccctggccaaccgg
gtcctctcgcgctcgcggcgcgggggaggcggcctgcacctgccggccggagccgtcgag
ctggtcgcccagcgccccagcggtcccgccgtgcgcttcgagacctacgacgacgacgtc
gccgaggccgagggcgccgtcgcccaggtgcgccgtctgcaggccgccggggtccccctg
agcgagatcgcgatcctgtaccgcaccaactcccagtccgaggtcttcgagcaggccctc
gccggagcccagatcggctacctcgtgcgcggcggtgagcgcttcttcgagcgcgaggag
gtcaagcgcgccatggccgtcatcctcggtgccgcccgcaccgagaaggccaccctgacc
ggtgacctcggcctggatgctcgtaccgtcctggcccgtgagggctggagcgaggagccg
ccggccccccgcggagccgtgcgcgagcgctgggacgccctcaacgccctggtggccctg
gctgacgagatgtcccagacccgcggcgccgacctcgacgccttccacaccgagctgcga
gagcgtgccgacgcccagaacgcccccaccgtcgagggcgtcaccctctcctccctgcat
gccgccaaggggctggagtgggacgccgtcatccttgcgggcgcctgcgagggactgctg
cccatctccctggccgaggggcaggccgccatcgaggaggagcggcgcctgctctacgtg
ggcgtcacccgcgcgcgagagcatctcatcatctcctacgcgcgcgcccgtaacgccgga
ggccgggccgcccgcaagccctcccgcttcctggacggcctgtggcccaccgcccagggc
tcccgcgatgcctcccggcgtcagggacgactcagtgccaaggagcgctcccggcagtcc
gcggccgacttcgaggccagtaacgacccgcgcaccattgctctgttcgaggagctgcgg
gcctggcgctcaggcgtggccaaggagcgctccaagcccgcctacacggtcttcgccgac
gccaccttgcgggacatcgccgtcgtcaagcccaccaccttgccccagctctccctcatc
cgtggtgtgggtgccaccaagctccaggagtacggcgggtcggtcctcgccctcctgcgc
gacttcgagagcgggagctga
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