Aneurinibacillus sp. Ricciae_BoGa-3: PP175_03765
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Entry
PP175_03765 CDS
T10201
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aneu Aneurinibacillus sp. Ricciae_BoGa-3
Brite
KEGG Orthology (KO) [BR:
aneu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aneu03009
]
PP175_03765 (rlmD)
Enzymes [BR:
aneu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PP175_03765 (rlmD)
Ribosome biogenesis [BR:
aneu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PP175_03765 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
Methyltransf_15
PCMT
RrnaAD
UPF0020
Methyltransf_4
Methyltransf_23
Methyltransf_12
Ubie_methyltran
TPMT
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
WCK55116
LinkDB
All DBs
Position
709882..711288
Genome browser
AA seq
468 aa
AA seq
DB search
MANKRKQHNNEAAVLDLPVEKNQQIELTIEDLSHEGNGVGRVEGYTVFVPGALPGERVSV
AITKLKKQYGYARLLDIVSASEDRREPPCPIYKRCGGCTLQHFDYQAQLSFKRKLVEDNL
RRIGKIEGVTVHPTIGMDNPWRYRNKAQVPIGEEEGGLIGGFYAQRSHEIIDMESCLIQH
EKSDFLVNQVKKIASKYGIPAYDEGSHRGVLRHVVTKVGFATGELMIVLITNSDKLPHQQ
ALVEELAREIPDLKSVVQNINTKRTNVIFGDNTRVLWGEEYIYDTIGDVKFAISARSFYQ
VNPVQTEKLYSKALEYAGLTGQENVVDAYCGIGTISLFLAQKAKKVFGVEIVPDAIEDAK
RNAALNGMDNVEFQVGEAEKVIPAWYTLGNRADVMVVDPPRKGCDEALLQTIIDMKPEKV
VYVSCNPSTLARDLRILEDGGYRTVEVQPVDMFPHTTHVECVVKLYLK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaataaacgaaagcaacacaacaatgaggcagcggttcttgatctgccggtcgaa
aaaaatcagcagatcgagctgaccatcgaagacctgtcgcatgaaggaaacggtgtcgga
cgcgttgagggctatacggtgtttgtgccgggcgccctccccggagagcgggtatcggtt
gcgataaccaagcttaagaagcagtacggttacgcgcgcctgttagacatcgtctcagcc
agtgaggaccggcgcgagccaccatgccccatctataaacggtgcggcggctgtacgctg
cagcactttgactaccaagcgcagctaagtttcaagcgcaagctggtggaggacaacctg
cgccgcatcggcaaaattgaaggcgtaactgttcacccgacgatcggcatggacaatcca
tggcgctaccgcaataaagcgcaggtgccgatcggggaagaggaaggcggcctgatcggg
ggcttctacgcccagcgctcgcatgagatcatcgacatggaaagctgcctgatccagcac
gagaagagcgactttctggtgaatcaggtgaagaaaatcgcgagtaaatacgggattccg
gcgtatgacgaggggagccacaggggcgtcttgcgccatgtggtaaccaaggttggcttt
gcgaccggcgagctgatgattgtgctgattacgaactccgataagctgccgcaccagcag
gcgttggtggaagagctggcccgcgagatccccgacctcaaaagcgttgtgcagaacatc
aacacgaagcgcacgaatgtgatcttcggcgacaacacccgggtgctgtggggcgaggaa
tacatctatgacacgatcggcgatgtgaagttcgccatctccgcgcgttcgttctaccag
gtgaatccggtgcagacggagaagctgtactcgaaagccctggaatatgcgggtctgacc
ggtcaggagaatgtagtggacgcgtactgcggcatcgggacgatctcgctgttccttgcc
cagaaagcgaagaaggtgttcggcgtggaaattgtgccggatgcgatcgaagatgcgaag
cgaaatgctgcgctgaatggcatggacaatgtggagttccaggtaggggaagcggaaaag
gtgatccctgcatggtatacgctgggcaaccgtgctgatgtgatggtcgtcgacccacca
aggaagggctgtgatgaggcgctcctgcagacgatcattgatatgaagccagagaaggtt
gtgtatgtgtcgtgtaatccatcaaccctcgcgcgtgatctacgcatcctagaggatggc
ggttatagaacggttgaggtgcagcctgtggatatgtttccgcatacgacacatgtggag
tgcgtggtaaagctatatttgaaatag
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