Aneurinibacillus sp. Ricciae_BoGa-3: PP175_09640
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Entry
PP175_09640 CDS
T10201
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aneu Aneurinibacillus sp. Ricciae_BoGa-3
Pathway
aneu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aneu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PP175_09640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aneu03019
]
PP175_09640
03009 Ribosome biogenesis [BR:
aneu03009
]
PP175_09640
Enzymes [BR:
aneu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PP175_09640
Messenger RNA biogenesis [BR:
aneu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PP175_09640
Ribosome biogenesis [BR:
aneu03009
]
Prokaryotic type
rRNA helicases
PP175_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
NAT10_TcmA_helicase
AAA_30
SMC_N
Motif
Other DBs
NCBI-ProteinID:
WCK56144
LinkDB
All DBs
Position
1869408..1870991
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AA seq
527 aa
AA seq
DB search
MVHFSDFALHKSIQQAIHDMGFEEPSPIQEQCIPKILEGGDLIGQAQTGTGKTAAFGLPL
IEKVTGQNAVQAIVLTPTRELAIQVSGELRKIAKYKKVRTLPIYGGQSIGHQIRALKQGV
QVVIGTPGRVLDHLRRKTLHLDQVKMLVLDEADEMLDMGFQEDIESIIRETSTDRQTLLF
SATMPQEILRLARKYMQDPQTVSISRKEVTAPTIEQVYYKVFERSKLESLCRIIDSEELE
LGIVFCRTKRGVDELTEALQERGYMASGLHGDLSQAQRDKVMKSFRDSTIELLVATDVAA
RGIDVGNVSHVINYDIPQDPESYVHRIGRTGRAGRRGIAITLVTPREMKQLRTIEKVSKS
TLESRNVPSIEEVLERQQTIWRQQLVSLMDGEHELAPFMQVVDGLHEDYPVDKIAAAALS
LAFSSTLADDASETYDFGETGASRGYVRFFINIGRSLDIRPPDLIKEMTELVGISSKAIG
KIDIFENFTFIEVSEDVAPFVYEAMRNSRIKGKRVNVEPAKPRAKRT
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggtacatttctcagattttgccctgcataagtccattcagcaggcgatccatgatatg
ggattcgaagagccttctccaattcaggaacagtgtatccccaagattcttgaaggagga
gatcttattggacaggcgcagactggcacaggaaaaacagcagcctttggccttcctttg
attgaaaaagtgaccggccaaaatgcggtgcaggctattgtgcttacgccgacgcgcgag
ctggctatacaggtgtcaggcgagctgcgtaaaatcgcgaagtataaaaaagtccggact
cttccaatatatggtgggcagtcgatcggtcaccaaattcgtgcgctgaagcagggcgtg
caggtagtgatcggtacgccaggccgcgtgctggatcatctgcgccgtaaaacgctccac
ctcgaccaggtgaaaatgcttgtgcttgatgaagcggacgaaatgcttgacatgggattt
caggaggatattgagtccattatccgggagacgtcaacagatcgccagacgcttcttttc
tcggcgacgatgcctcaggaaattttgcgtcttgcccgcaaatatatgcaggatccgcaa
accgtgagcattagccgcaaagaggtaacagcacctacgattgagcaggtctactataaa
gtgtttgaacgcagcaaacttgagtcgttgtgccggattatcgacagtgaagagcttgaa
cttggcatcgttttctgccggacaaagcgcggcgtagacgaattaacggaagctctgcag
gagcgcggctacatggccagcgggcttcatggtgatttaagccaggcacagcgggataaa
gtcatgaaatcattccgtgactccaccatcgaactgctggttgccacagacgtggcggca
cggggaattgacgttggcaacgtgtcccatgttatcaactatgatatcccacaggatccg
gaaagctatgtccaccgcattggccggacgggccgtgccgggcgccgcggaattgcgatc
acactggtcactccgcgagaaatgaaacagcttcgcaccatagagaaagtatcaaaatca
acattggaatcccgcaacgtgccttcgattgaagaagtcttagaacgccagcaaaccatc
tggaggcagcagctggtcagcctgatggacggggagcatgagcttgcgccgtttatgcag
gttgtggatggccttcacgaagattatccggtggacaaaatcgccgcggcggctctttct
ttggccttctccagcaccttagcagacgatgcttcggagacgtatgattttggcgagaca
ggggcatccaggggatatgtgcgcttcttcattaacattggacgcagcctcgatatccgc
ccgccagatctcattaaagaaatgacagaacttgtagggatctcgagcaaggcgattggc
aaaatcgatatctttgagaacttcacttttattgaagtatctgaggatgtcgcgccgttt
gtgtacgaagcaatgcgtaactcacgcattaaaggtaaacgggtaaatgtcgagccggct
aaacctcgtgcaaaaagaacctaa
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